RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 H3BM21 787 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 PPM1DO15297 605 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 KCNJ13O60928 360 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 NIPSNAP2O75323 286 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 FAM155BO75949 473 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 WISP3O95389 354 aaPredicted RBP10.37□□□□□ -0.75
LIG1-210ENST00000596332 TPBGLP0DKB5 382 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 CTSEP14091 401 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 AOAHP28039 575 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 ACADLP28330 430 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 GCAP28676 217 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 AKT1P31749 480 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 SLC19A1P41440 591 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 ACTR1BP42025 376 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 CLCN7P51798 805 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 ACTR1AP61163 376 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 ILF3Q12906 894 aaKnown RBP eCLIP10.37□□□□□ -0.75
LIG1-210ENST00000596332 DNAJC3Q13217 504 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 THOC5Q13769 683 aaKnown RBP10.37□□□□□ -0.75
LIG1-210ENST00000596332 HLTFQ14527 1009 aaKnown RBP eCLIP10.37□□□□□ -0.75
LIG1-210ENST00000596332 EFTUD2Q15029 972 aaKnown RBP eCLIP10.37□□□□□ -0.757e-6■■■■■ 28.8
LIG1-210ENST00000596332 UAP1Q16222 522 aaPredicted RBP10.37□□□□□ -0.75
LIG1-210ENST00000596332 KBTBD12Q3ZCT8 623 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.37□□□□□ -0.75
LIG1-210ENST00000596332 RBM20Q5T481 1227 aaKnown RBP10.37□□□□□ -0.75
LIG1-210ENST00000596332 AGAP9Q5VTM2 703 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 KIAA0408Q6ZU52 694 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 SDCCAG8Q86SQ7 713 aaPredicted RBP10.37□□□□□ -0.75
LIG1-210ENST00000596332 GLRX5Q86SX6 157 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 SLCO6A1Q86UG4 719 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 AMZ2Q86W34 360 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 TRAPPC5Q8IUR0 188 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 PALM2Q8IXS6 379 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 SFRP1Q8N474 314 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 KYQ8NBH2 561 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 FAM46DQ8NEK8 389 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 RHBDD1Q8TEB9 315 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 AENQ8WTP8 325 aaKnown RBP10.37□□□□□ -0.75
LIG1-210ENST00000596332 DCUN1D1Q96GG9 259 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 TTC25Q96NG3 672 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 INSM2Q96T92 566 aaPredicted RBP10.37□□□□□ -0.75
LIG1-210ENST00000596332 NRTNQ99748 197 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 PARD6BQ9BYG5 372 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 GSDMCQ9BYG8 508 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 INTS10Q9NVR2 710 aaKnown RBP10.37□□□□□ -0.75
LIG1-210ENST00000596332 RAB21Q9UL25 225 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 DNAJC16Q9Y2G8 782 aa10.37□□□□□ -0.75
LIG1-210ENST00000596332 TRBV23OR9-2A0A075B6M9 112 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 NEMP2A6NFY4 417 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 NDUFS3O75489 264 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 SLCO2B1O94956 709 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 ANXA6P08133 673 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 CKMT1AP12532 417 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 PKMP14618 531 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 CSRP1P21291 193 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 CD9P21926 228 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 RPL10P27635 214 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 GRK6P43250 576 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 PREPP48147 710 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 CDKN2DP55273 166 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 EIF3BP55884 814 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 MAZP56270 477 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 UBE2IP63279 158 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 TUBB4BP68371 445 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 SUZ12Q15022 739 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 AARS2Q5JTZ9 985 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 PERM1Q5SV97 790 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 ZCCHC8Q6NZY4 707 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 TMEM207Q6UWW9 146 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 CYHR1Q6ZMK1 362 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 ZC3HC1Q86WB0 502 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 LRRC6Q86X45 466 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 GKN2Q86XP6 184 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 CFAP206Q8IYR0 622 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 ARL14Q8N4G2 192 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 DEFB124Q8NES8 71 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 HM13Q8TCT9 377 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 CALML6Q8TD86 181 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 SLC37A2Q8TED4 501 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 RMDN2Q96LZ7 410 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 OLFM1Q99784 485 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 FAM167BQ9BTA0 163 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 AARSD1Q9BTE6 412 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 ZCCHC2Q9C0B9 1178 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 TWSG1Q9GZX9 223 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 ACSS3Q9H6R3 686 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 COG4Q9H9E3 785 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 MTRF1LQ9UGC7 380 aaKnown RBP10.36□□□□□ -0.75
LIG1-210ENST00000596332 PCNX2A6NKB5 2137 aa10.36□□□□□ -0.75
LIG1-210ENST00000596332 ARHGEF17Q96PE2 2063 aaPredicted RBP10.35□□□□□ -0.75
LIG1-210ENST00000596332 DCDC2BA2VCK2 349 aa10.35□□□□□ -0.75
LIG1-210ENST00000596332 EME2A4GXA9 379 aaPredicted RBP10.35□□□□□ -0.75
LIG1-210ENST00000596332 OR52A4PA6NMU1 304 aa10.35□□□□□ -0.75
LIG1-210ENST00000596332 CFAP99D6REC4 459 aa10.35□□□□□ -0.75
LIG1-210ENST00000596332 RIPK2O43353 540 aa10.35□□□□□ -0.75
LIG1-210ENST00000596332 B4GAT1O43505 415 aa10.35□□□□□ -0.75
LIG1-210ENST00000596332 ESR1P03372 595 aa10.35□□□□□ -0.75
LIG1-210ENST00000596332 OR56A5P0C7T3 313 aa10.35□□□□□ -0.75
LIG1-210ENST00000596332 RALBP11234 206 aa10.35□□□□□ -0.75
LIG1-210ENST00000596332 F3P13726 295 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms