RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PPM1MQ96MI6 270 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 NUDT9Q9BW91 350 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 UGT1A7Q9HAW7 530 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 UGT1A10Q9HAW8 530 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 UGT1A8Q9HAW9 530 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 GLOD4Q9HC38 313 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 HRASLS2Q9NWW9 162 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 IL17CQ9P0M4 197 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 CTTNBP2NLQ9P2B4 639 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 UVRAGQ9P2Y5 699 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 BTRCQ9Y297 605 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 CFAP20Q9Y6A4 193 aaKnown RBP9.73□□□□□ -0.85
LIG1-209ENST00000596104 DNMT3AQ9Y6K1 912 aaPredicted RBP9.73□□□□□ -0.85
LIG1-209ENST00000596104 CREBBPQ92793 2442 aa9.73□□□□□ -0.85
LIG1-209ENST00000596104 LOC285095A0A1B0GVY8 99 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 UBA6A0AVT1 1052 aaPredicted RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 LRRD1A4D1F6 860 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 MEN1O00255 615 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 DPM1O60762 260 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 TMEM63AO94886 807 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ZBTB11O95625 1053 aaPredicted RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 COL8A1P27658 744 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 CD68P34810 354 aaPredicted RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 CHRNA4P43681 627 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 KPNA2P52292 529 aaKnown RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 ITGA1P56199 1179 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 GSDMDP57764 484 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ZBED6P86452 979 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ABRQ12979 859 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 IQCB1Q15051 598 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 NFKBIBQ15653 356 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 TEX44Q53QW1 395 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ZNF789Q5FWF6 425 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 LDLRAP1Q5SW96 308 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 GPRC6AQ5T6X5 926 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ZNF787Q6DD87 383 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 CCDC70Q6NSX1 233 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 DUS1LQ6P1R4 473 aaKnown RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 FBXO38Q6PIJ6 1188 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 TMEM220Q6QAJ8 160 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 KDELC1Q6UW63 502 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 FAM198BQ6UWH4 519 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 B4GALNT4Q76KP1 1039 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 MAMDC2Q7Z304 686 aaPredicted RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 OOSP2Q86WS3 158 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 VSIG1Q86XK7 387 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 HPS6Q86YV9 775 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 DSELQ8IZU8 1212 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ZBTB2Q8N680 514 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ENDOVQ8N8Q3 282 aaKnown RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 GLIS1Q8NBF1 620 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 SPDYE1Q8NFV5 336 aaPredicted RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 ZFPM2Q8WW38 1151 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 PNPLA2Q96AD5 504 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 TCTN2Q96GX1 697 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 TEKT5Q96M29 485 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 TTC25Q96NG3 672 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 INSM2Q96T92 566 aaPredicted RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 SMAD5Q99717 465 aaKnown RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 PACSIN1Q9BY11 444 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 MFRPQ9BY79 579 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 NLNQ9BYT8 704 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ZCCHC2Q9C0B9 1178 aaKnown RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 TRABDQ9H4I3 376 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 KIR3DX1Q9H7L2 352 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 SLAMF7Q9NQ25 335 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 IMP3Q9NV31 184 aaKnown RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 SMOXQ9NWM0 555 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 UBP1Q9NZI7 540 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 TMEM63CQ9P1W3 806 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 SLC24A2Q9UI40 661 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 TCFL5Q9UL49 500 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 CAPN11Q9UMQ6 739 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 SNX7Q9UNH6 387 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 SHANK1Q9Y566 2161 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ITPR2Q14571 2701 aa9.72□□□□□ -0.85
LIG1-209ENST00000596104 ZNF106Q9H2Y7 1883 aaKnown RBP9.72□□□□□ -0.85
LIG1-209ENST00000596104 A0A0A6YYK5 440 aaPredicted RBP9.71□□□□□ -0.86
LIG1-209ENST00000596104 OR6C74A6NCV1 312 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 OR2AG2A6NM03 316 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 APOL1O14791 398 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 PPP1R12AO14974 1030 aaPredicted RBP9.71□□□□□ -0.86
LIG1-209ENST00000596104 ZNF185O15231 689 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 KRT86O43790 486 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 CLDN1O95832 211 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 SERPINC1P01008 464 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 LDLRP01130 860 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 EPOP01588 193 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 KLK3P07288 261 aaPredicted RBP9.71□□□□□ -0.86
LIG1-209ENST00000596104 H2AFZP0C0S5 128 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 PTPN3P26045 913 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 VARSP26640 1264 aaKnown RBP9.71□□□□□ -0.86
LIG1-209ENST00000596104 SPAM1P38567 509 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 DCTP40126 519 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 ARCN1P48444 511 aaKnown RBP9.71□□□□□ -0.86
LIG1-209ENST00000596104 VAV2P52735 878 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 WNT3AP56704 352 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 WASHC5Q12768 1159 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 XRCC4Q13426 336 aa9.71□□□□□ -0.86
LIG1-209ENST00000596104 PRKD1Q15139 912 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms