RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ZNF567Q8N184 647 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 RYBPQ8N488 228 aaPredicted RBP12.71□□□□□ -0.37
SCAF1-202ENST00000595242 NLGN4YQ8NFZ3 816 aaPredicted RBP12.71□□□□□ -0.37
SCAF1-202ENST00000595242 OR6K2Q8NGY2 324 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 DCAKDQ8WVC6 231 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 TBC1D31Q96DN5 1066 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 PAFAH2Q99487 392 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 SIK2Q9H0K1 926 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 DPEP2Q9H4A9 486 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 PLAC1Q9HBJ0 212 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 INTS9Q9NV88 658 aaKnown RBP12.71□□□□□ -0.37
SCAF1-202ENST00000595242 KLQ9UEF7 1012 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 TRHDEQ9UKU6 1024 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 TTLL3Q9Y4R7 772 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 KCNMB2Q9Y691 235 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 DIDO1Q9BTC0 2240 aaKnown RBP12.7□□□□□ -0.38
SCAF1-202ENST00000595242 TCRBV9S1A1TA0A576 114 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 TMEM120BA0PK00 339 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 SUN1O94901 812 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 BRAFP15056 766 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 TCN2P20062 427 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 MAP4P27816 1152 aaKnown RBP12.7□□□□□ -0.38
SCAF1-202ENST00000595242 MC1RQ01726 317 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 SLC20A2Q08357 652 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 AP1B1Q10567 949 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 HP1BP3Q5SSJ5 553 aaPredicted RBP12.7□□□□□ -0.38
SCAF1-202ENST00000595242 ANKS6Q68DC2 871 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 TTC7BQ86TV6 843 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 ARHGAP12Q8IWW6 846 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 ZNF683Q8IZ20 524 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 AGBL5Q8NDL9 886 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 OR7D4Q8NG98 312 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 CXorf40AQ8TE69 158 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 SLC44A1Q8WWI5 657 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 STARD8Q92502 1023 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 FATE1Q969F0 183 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 PDXPQ96GD0 296 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 SGSM3Q96HU1 749 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
SCAF1-202ENST00000595242 EBNA1BP2Q99848 306 aaKnown RBP12.7□□□□□ -0.38
SCAF1-202ENST00000595242 SPON2Q9BUD6 331 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 WRAP53Q9BUR4 548 aaKnown RBP12.7□□□□□ -0.38
SCAF1-202ENST00000595242 APOOQ9BUR5 198 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 TM6SF2Q9BZW4 377 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 ZNF180Q9UJW8 692 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 FCF1Q9Y324 198 aaKnown RBP12.7□□□□□ -0.38
SCAF1-202ENST00000595242 KCTD3Q9Y597 815 aa12.7□□□□□ -0.38
SCAF1-202ENST00000595242 WIPF3A6NGB9 483 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 RASA4BC9J798 803 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 POC1B-GALNT4F8VUJ3 575 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 NDUFAB1O14561 156 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 RASA4O43374 803 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 ZMPSTE24O75844 475 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 UGT2B4P06133 528 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 CCNCP24863 283 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 PSMB4P28070 264 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 OR1E1P30953 314 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 CSTF2P33240 577 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 LIMK2P53671 638 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 HNRNPH2P55795 449 aaKnown RBP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 ARF5P84085 180 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 TRA2AQ13595 282 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 INPP5AQ14642 412 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 LRRC14Q15048 493 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 CLPPQ16740 277 aaPredicted RBP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 EIF2S3LQ2VIR3 472 aaKnown RBP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 CRTC2Q53ET0 693 aaPredicted RBP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 KCTD11Q693B1 232 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 ITPRIPL1Q6GPH6 555 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 ZNF449Q6P9G9 518 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 TFAP2DQ7Z6R9 452 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 FAM129CQ86XR2 697 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 LRRC49Q8IUZ0 686 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 TP53INP2Q8IXH6 220 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 NRSN1Q8IZ57 195 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 RTL3Q8N8U3 475 aaKnown RBP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 CCNYQ8ND76 341 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 ZNF473Q8WTR7 871 aaKnown RBP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 LRRN4Q8WUT4 740 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 CCT8L2Q96SF2 557 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 GORASP1Q9BQQ3 440 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 GBA3Q9H227 469 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 OCIAD1Q9NX40 245 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 DONSONQ9NYP3 566 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 PPARGC1AQ9UBK2 798 aaKnown RBP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 ZC3H7BQ9UGR2 993 aaKnown RBP12.69□□□□□ -0.38
SCAF1-202ENST00000595242 OR1A2Q9Y585 309 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 SNX10Q9Y5X0 201 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 ACTL7AQ9Y615 435 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 DGKBQ9Y6T7 804 aa12.69□□□□□ -0.38
SCAF1-202ENST00000595242 CSMD2Q7Z408 3487 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 PDZD2O15018 2839 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 IGLV3-10A0A075B6K4 115 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 FAM159BA6NKW6 160 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 RHPN2P1A8MT19 583 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 ZW10O43264 779 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 AVILO75366 819 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 AP2A1O95782 977 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 CPP00450 1065 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms