RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ANKRD36A6QL64 1941 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 A0A1W2PPW3 197 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 KRBA1A5PL33 1030 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 FAM47E-STBD1D6RA91 191 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 UBXN8O00124 270 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 ARSAP15289 507 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 HOXB8P17481 243 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 GSSP48637 474 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 SUOXP51687 545 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 GRSF1Q12849 480 aaKnown RBP eCLIP16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 NHSL2Q5HYW2 709 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 AARS2Q5JTZ9 985 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 PPM1LQ5SGD2 360 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 ARMC12Q5T9G4 340 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 CMTM8Q8IZV2 173 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 TTC30BQ8N4P2 665 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 CPSF7Q8N684 471 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 STON2Q8WXE9 905 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 TFAP2CQ92754 450 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 EID2BQ96D98 161 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 MYO19Q96H55 970 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 ZNF641Q96N77 438 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 GPR21Q99679 349 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 WDR41Q9HAD4 459 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 PARVBQ9HBI1 364 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 TRIM38O00635 465 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 BNIP3LO60238 219 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 FZD6O60353 706 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 RFPL2O75678 378 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 SIX3O95343 332 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 FGBP02675 491 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 IMPDH1P20839 514 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 CDH13P55290 713 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 OXA1LQ15070 435 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 CYP2A13Q16696 494 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 PFKFB4Q16877 469 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 MPPE1Q53F39 396 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 SETMARQ53H47 684 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 ZNF678Q5SXM1 525 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 IRAK1BP1Q5VVH5 260 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 MYO1HQ8N1T3 1032 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 FAM47BQ8NA70 645 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 TAMM41Q96BW9 452 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 ARMC5Q96C12 935 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 MROQ9BYG7 248 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 GSTO2Q9H4Y5 243 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 PKP3Q9Y446 797 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 DOCK6Q96HP0 2047 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 KIAA1671Q9BY89 1806 aa16.85■□□□□ 0.29
SHKBP1-205ENST00000594973 CHD9Q3L8U1 2897 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 LCHNA4D1U4 455 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 LRRC14BA6NHZ5 514 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 UBFD1O14562 309 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 NIPSNAP2O75323 286 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 PGLSO95336 258 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 GLUD1P00367 558 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 NELFEP18615 380 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 PKNOX1P55347 436 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 HTRA4P83105 476 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 FBXO48Q5FWF7 155 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 FGD3Q5JSP0 725 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 CLEC6AQ6EIG7 209 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 PPP4R4Q6NUP7 873 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 TMEM214Q6NUQ4 689 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 GPR65Q8IYL9 337 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 PTGR2Q8N8N7 351 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 TANKQ92844 425 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 ASB9Q96DX5 294 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 TCEAL4Q96EI5 215 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 TCF12Q99081 682 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 SLC30A3Q99726 388 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 TUBA1CQ9BQE3 449 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 EFCAB1Q9HAE3 211 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 POPDC3Q9HBV1 291 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 INSL6Q9Y581 213 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 PRRC2BQ5JSZ5 2229 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 OBSL1O75147 1896 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 TRPC5OSA6NMA1 111 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 A8MX80 341 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 KDM1AO60341 852 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 CTSOP43234 321 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 TTPAP49638 278 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 STK19P49842 368 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 ARPC4P59998 168 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 C1QTNF8P60827 252 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 AP1S1P61966 158 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 BNIP3Q12983 259 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 CAMK2BQ13554 666 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 TTC33Q6PID6 262 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 CYP2U1Q7Z449 544 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 SLC15A4Q8N697 577 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 PACRGLQ8N7B6 248 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 SIDT2Q8NBJ9 832 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 CLP1Q92989 425 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 ACDQ96AP0 544 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 SARS2Q9NP81 518 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 DUS2Q9NX74 493 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 SUCOQ9UBS9 1254 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 IKZF3Q9UKT9 509 aa16.84■□□□□ 0.29
SHKBP1-205ENST00000594973 C5orf42Q9H799 3197 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms