RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 BMPERQ8N8U9 685 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 LSM14AQ8ND56 463 aaKnown RBP14.96□□□□□ -0.01
TRIM28-203ENST00000593582 STYXQ8WUJ0 223 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 PMEPA1Q969W9 287 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 LINC00615Q96LM1 132 aaPredicted RBP14.96□□□□□ -0.01
TRIM28-203ENST00000593582 C9orf72Q96LT7 481 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 TGM7Q96PF1 710 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 TEFMQ96QE5 360 aaKnown RBP14.96□□□□□ -0.01
TRIM28-203ENST00000593582 ETNK1Q9HBU6 452 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 FAM8A1Q9UBU6 413 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 B3GALT1Q9Y5Z6 326 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 ERVH48-1M5A8F1 160 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 TK2O00142 265 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 ATXN7O15265 892 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-203ENST00000593582 TOX3O15405 576 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-203ENST00000593582 CAPN5O15484 640 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-203ENST00000593582 RASSF9O75901 435 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 PRLHRP49683 370 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 ATP1A2P50993 1020 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 GFERP55789 205 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 CCZ1BP86790 482 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 CCZ1P86791 482 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-203ENST00000593582 MC2RQ01718 297 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 CDH17Q12864 832 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 LAMB3Q13751 1172 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 CCNG2Q16589 344 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 ANKS6Q68DC2 871 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 KLHL35Q6PF15 583 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 PPP1R21Q6ZMI0 780 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 TAS2R42Q7RTR8 314 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 CFAP206Q8IYR0 622 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 OR52K1Q8NGK4 314 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 NAT14Q8WUY8 206 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 MAIP1Q8WWC4 291 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 ZDHHC12Q96GR4 267 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 CDKN2AIPNLQ96HQ2 116 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 ZPBPQ9BS86 351 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 WWP1Q9H0M0 922 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 VPS37BQ9H9H4 285 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 FBXO8Q9NRD0 319 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 RAB6BQ9NRW1 208 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 IMP3Q9NV31 184 aaKnown RBP14.95□□□□□ -0.02
TRIM28-203ENST00000593582 ZDHHC3Q9NYG2 299 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 PAK5Q9P286 719 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 ZKSCAN5Q9Y2L8 839 aa14.95□□□□□ -0.02
TRIM28-203ENST00000593582 KALRNO60229 2985 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 AHCTF1Q8WYP5 2266 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 IGLV3-16A0A075B6K0 115 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 MROH6A6NGR9 719 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 EFSO43281 561 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 SGTAO43765 313 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 SUN1O94901 812 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 SLC35G4P0C7Q5 338 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 MTHFD1P11586 935 aaKnown RBP14.94□□□□□ -0.02
TRIM28-203ENST00000593582 ACRV1P26436 265 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 ARSDP51689 593 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 CACNG1Q06432 222 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 PLCL1Q15111 1095 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 CCDC38Q502W7 563 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 TAF1BQ53T94 588 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-203ENST00000593582 IRGCQ6NXR0 463 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 CEACAM20Q6UY09 585 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 SERPINA9Q86WD7 417 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 ZSCAN1Q8NBB4 408 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 GPR150Q8NGU9 434 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 HM13Q8TCT9 377 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 ZFPM2Q8WW38 1151 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 JPH3Q8WXH2 748 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-203ENST00000593582 SLC39A7Q92504 469 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 RSC1A1Q92681 617 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 C12orf66Q96MD2 445 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 CTRCQ99895 268 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 CCM2Q9BSQ5 444 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 TLR10Q9BXR5 811 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 EPHA6Q9UF33 1036 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 PPP2R2CQ9Y2T4 447 aa14.94□□□□□ -0.02
TRIM28-203ENST00000593582 CFAP20Q9Y6A4 193 aaKnown RBP14.94□□□□□ -0.02
TRIM28-203ENST00000593582 ZNF106Q9H2Y7 1883 aaKnown RBP14.94□□□□□ -0.02
TRIM28-203ENST00000593582 TRBV5-4A0A0C4DH59 114 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 C17orf113A0A1B0GUU1 675 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 HEATR9A2RTY3 570 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 POLR1CO15160 346 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-203ENST00000593582 FGGP02679 453 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 POLBP06746 335 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 APRTP07741 180 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 ETS1P14921 441 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 MSNP26038 577 aaKnown RBP14.93□□□□□ -0.02
TRIM28-203ENST00000593582 LEPRP48357 1165 aaKnown RBP14.93□□□□□ -0.02
TRIM28-203ENST00000593582 CDKN1CP49918 316 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-203ENST00000593582 SEMA5AQ13591 1074 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 KRT33BQ14525 404 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 GSE1Q14687 1217 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 SIX1Q15475 284 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-203ENST00000593582 DRICH1Q6PGQ1 229 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-203ENST00000593582 GSTA5Q7RTV2 222 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 VASH2Q86V25 355 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 IL22RA1Q8N6P7 574 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 INSM2Q96T92 566 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-203ENST00000593582 RAB33BQ9H082 229 aa14.93□□□□□ -0.02
TRIM28-203ENST00000593582 ZNF768Q9H5H4 540 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms