RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ZNF77Q15935 545 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 CRY1Q16526 586 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 C18orf21Q32NC0 220 aaPredicted RBP19.39■□□□□ 0.69
CLIP3-206ENST00000593074 CARD16Q5EG05 197 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 RARS2Q5T160 578 aaKnown RBP19.39■□□□□ 0.69
CLIP3-206ENST00000593074 TMEM154Q6P9G4 183 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 SPATA24Q86W54 205 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 CHCHD4Q8N4Q1 142 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 HOPXQ9BPY8 73 aaPredicted RBP19.39■□□□□ 0.69
CLIP3-206ENST00000593074 PCDHAC1Q9H158 963 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 SPATS2LQ9NUQ6 558 aaKnown RBP19.39■□□□□ 0.69
CLIP3-206ENST00000593074 PLXNB3Q9ULL4 1909 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 ANKRD12Q6UB98 2062 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 MAGEA13PA6NCF6 341 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 FXYD1O00168 92 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 OR7A17O14581 309 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 POP4O95707 220 aaKnown RBP19.39■□□□□ 0.69
CLIP3-206ENST00000593074 NSG1P42857 185 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 ZFP36L2P47974 494 aaKnown RBP19.39■□□□□ 0.69
CLIP3-206ENST00000593074 PTSQ03393 145 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 GTF2H2Q13888 395 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 GRAMD1BQ3KR37 738 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 GTF2H2CQ6P1K8 395 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 ELMSAN1Q6PJG2 1045 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 DPY19L3Q6ZPD9 716 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 LILRA2Q8N149 483 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 MINDY1Q8N5J2 469 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 MIEF2Q96C03 454 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 LRGUKQ96M69 825 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 ZSWIM3Q96MP5 696 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 BTBD9Q96Q07 612 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 CDK15Q96Q40 435 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 NSUN3Q9H649 340 aaKnown RBP19.39■□□□□ 0.69
CLIP3-206ENST00000593074 ZDHHC6Q9H6R6 413 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 ZMYM5Q9UJ78 669 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 DTNAQ9Y4J8 743 aa19.39■□□□□ 0.69
CLIP3-206ENST00000593074 ZNF197O14709 1029 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 PER2O15055 1255 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 CAPNS1P04632 268 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 UQCRBP14927 111 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 MYOGP15173 224 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 RHDQ02161 417 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 DMC1Q14565 340 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 PDCD4Q53EL6 469 aaKnown RBP19.38■□□□□ 0.69
CLIP3-206ENST00000593074 LY6G5CQ5SRR4 150 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 TICAM1Q8IUC6 712 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 ADGRG2Q8IZP9 1017 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 DCBLD1Q8N8Z6 715 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 UBTD2Q8WUN7 234 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 ASIC4Q96FT7 647 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 TMEM45AQ9NWC5 275 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 ZDHHC3Q9NYG2 299 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 DPP7Q9UHL4 492 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 SLCO3A1Q9UIG8 710 aa19.38■□□□□ 0.69
CLIP3-206ENST00000593074 TAPBPO15533 448 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 ARHGEF15O94989 841 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 OTCP00480 354 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 SEMG2Q02383 582 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 FOXM1Q08050 763 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 TRAF3Q13114 568 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 ZDHHC20Q5W0Z9 365 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 CATSPER1Q8NEC5 780 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 OTUB2Q96DC9 234 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 SPDL1Q96EA4 605 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 DUS3LQ96G46 650 aaKnown RBP19.37■□□□□ 0.69
CLIP3-206ENST00000593074 LRCH3Q96II8 777 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 VCXQ9H320 206 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 COPS7BQ9H9Q2 264 aaPredicted RBP19.37■□□□□ 0.69
CLIP3-206ENST00000593074 ELOVL2Q9NXB9 296 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 KLHL42Q9P2K6 505 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 SCOCQ9UIL1 159 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 MYOFQ9NZM1 2061 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 IGLV3-16A0A075B6K0 115 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 A0A1W2PQ67 120 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 TCRBV3S1A0A5B6 114 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 C9JVG2 144 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 UGT2B4P06133 528 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 CAPN1P07384 714 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 TCF3P15923 654 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 VCLP18206 1134 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 PHKG1Q16816 387 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 TTLL9Q3SXZ7 439 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 C6orf136Q5SQH8 315 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 METTL2BQ6P1Q9 378 aaKnown RBP19.37■□□□□ 0.69
CLIP3-206ENST00000593074 SCIMPQ6UWF3 145 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 Q6ZSR9 355 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 ADCY4Q8NFM4 1077 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 OR4F6Q8NGB9 312 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 DCUN1D1Q96GG9 259 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 TEX37Q96LM6 180 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 PKP2Q99959 881 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 RDH14Q9HBH5 336 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 GID8Q9NWU2 228 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 WNT6Q9Y6F9 365 aa19.37■□□□□ 0.69
CLIP3-206ENST00000593074 A0A1W2PP18 115 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 WASH3PC4AMC7 463 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 NME4O00746 187 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 CBSLP0DN79 551 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 CBSP35520 551 aa19.36■□□□□ 0.69
CLIP3-206ENST00000593074 HSPA7P48741 367 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms