RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SNX1Q13596 522 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 POU6F1Q14863 301 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 RPS6KA1Q15418 735 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 TAF1BQ53T94 588 aaPredicted RBP13.59□□□□□ -0.23
APOC1-208ENST00000592535 METRNLQ641Q3 311 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 PRUNE1Q86TP1 453 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 LRRC8AQ8IWT6 810 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 LSM14AQ8ND56 463 aaKnown RBP13.59□□□□□ -0.23
APOC1-208ENST00000592535 OR2L2Q8NH16 312 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 NKD1Q969G9 470 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 DCUN1D1Q96GG9 259 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 ASPSCR1Q9BZE9 553 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 WWP1Q9H0M0 922 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 APMAPQ9HDC9 416 aa13.59□□□□□ -0.23
APOC1-208ENST00000592535 IMP3Q9NV31 184 aaKnown RBP13.59□□□□□ -0.23
APOC1-208ENST00000592535 NLE1Q9NVX2 485 aaPredicted RBP13.59□□□□□ -0.23
APOC1-208ENST00000592535 CFAP20Q9Y6A4 193 aaKnown RBP13.59□□□□□ -0.23
APOC1-208ENST00000592535 TRBV5-4A0A0C4DH59 114 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 CCDC78A2IDD5 438 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 H7C0S8 307 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 KIF1CO43896 1103 aaKnown RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 C1QL1O75973 258 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 IFNB1P01574 187 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 CCDC175P0C221 793 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 RALBP11234 206 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 MTHFD1P11586 935 aaKnown RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 ETS1P14921 441 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 STIP1P31948 543 aaKnown RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 PRLHRP49683 370 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 SEPHS1P49903 392 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 ATP1A2P50993 1020 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 GPR33Q49SQ1 333 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 ZRANB3Q5FWF4 1079 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 DUS1LQ6P1R4 473 aaKnown RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 LILRA3Q8N6C8 439 aaPredicted RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 OR52K1Q8NGK4 314 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 UBE2Q2Q8WVN8 375 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 CDKN2AIPNLQ96HQ2 116 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 LINC00615Q96LM1 132 aaPredicted RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 RMDN2Q96LZ7 410 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 C12orf66Q96MD2 445 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 TEFMQ96QE5 360 aaKnown RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 INSM2Q96T92 566 aaPredicted RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 COPS8Q99627 209 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 FRMD8P1Q9BZ68 369 aaPredicted RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 ETNK1Q9HBU6 452 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 FBXO8Q9NRD0 319 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 SIDT1Q9NXL6 827 aaKnown RBP13.58□□□□□ -0.24
APOC1-208ENST00000592535 ZNF148Q9UQR1 794 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 PCDHGA4Q9Y5G9 962 aa13.58□□□□□ -0.24
APOC1-208ENST00000592535 IGLV3-16A0A075B6K0 115 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 KLHL33A6NCF5 533 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 CFAP99D6REC4 459 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 RAD1O60671 282 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 POLBP06746 335 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 ATP1B2P14415 290 aaPredicted RBP13.57□□□□□ -0.24
APOC1-208ENST00000592535 ACRV1P26436 265 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 PPP1CAP62136 330 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 CCZ1BP86790 482 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 CCZ1P86791 482 aaPredicted RBP13.57□□□□□ -0.24
APOC1-208ENST00000592535 SIX1Q15475 284 aaPredicted RBP13.57□□□□□ -0.24
APOC1-208ENST00000592535 IRGCQ6NXR0 463 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 CEACAM20Q6UY09 585 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 ZNF662Q6ZS27 426 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 FAM92BQ6ZTR7 304 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 TAS2R42Q7RTR8 314 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 LINC00523Q86TU6 105 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 SERPINA9Q86WD7 417 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 CFAP206Q8IYR0 622 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 GLIS1Q8NBF1 620 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
APOC1-208ENST00000592535 STYXQ8WUJ0 223 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 HEXDCQ8WVB3 486 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 WBP1Q96G27 269 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 ALS2CR12Q96Q35 445 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 SPRY4Q9C004 299 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 ZNF768Q9H5H4 540 aaKnown RBP13.57□□□□□ -0.24
APOC1-208ENST00000592535 ZDHHC3Q9NYG2 299 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 EPHA6Q9UF33 1036 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 ACSL5Q9ULC5 683 aa13.57□□□□□ -0.24
APOC1-208ENST00000592535 MROH6A6NGR9 719 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 ERI2A8K979 691 aaKnown RBP13.56□□□□□ -0.24
APOC1-208ENST00000592535 POLR1CO15160 346 aaPredicted RBP13.56□□□□□ -0.24
APOC1-208ENST00000592535 TOX3O15405 576 aaPredicted RBP13.56□□□□□ -0.24
APOC1-208ENST00000592535 RASSF9O75901 435 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 SLC35G4P0C7Q5 338 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 FDFT1P37268 417 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 GRIA1P42261 906 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 SH3BP2P78314 561 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 CACNG1Q06432 222 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 FOXM1Q08050 763 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 CDH17Q12864 832 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 LY6DQ14210 128 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 PLCL1Q15111 1095 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 CCDC38Q502W7 563 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 CACHD1Q5VU97 1274 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 PRSS42Q7Z5A4 293 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 PIANPQ8IYJ0 282 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 CACNA2D3Q8IZS8 1091 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 IL22RA1Q8N6P7 574 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms