RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CAND1Q86VP6 1230 aaKnown RBP17.85■□□□□ 0.45
DDX39A-212ENST00000590260 JPH3Q8WXH2 748 aaPredicted RBP17.85■□□□□ 0.45
DDX39A-212ENST00000590260 STRADBQ9C0K7 418 aa17.85■□□□□ 0.45
DDX39A-212ENST00000590260 WWP1Q9H0M0 922 aa17.85■□□□□ 0.45
DDX39A-212ENST00000590260 POT1Q9NUX5 634 aa17.85■□□□□ 0.45
DDX39A-212ENST00000590260 SYBUQ9NX95 663 aa17.85■□□□□ 0.45
DDX39A-212ENST00000590260 MARCH4Q9P2E8 410 aaPredicted RBP17.85■□□□□ 0.45
DDX39A-212ENST00000590260 CFAP20Q9Y6A4 193 aaKnown RBP17.85■□□□□ 0.45
DDX39A-212ENST00000590260 NBEAQ8NFP9 2946 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 TMX2-CTNND1H3BSU7 103 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 DUX1O43812 170 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 OR1I1O60431 355 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 VIPP01282 170 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 ITGA2BP08514 1039 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 FGF3P11487 239 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-212ENST00000590260 VCLP18206 1134 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 MGAT1P26572 445 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 ARNTP27540 789 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 GFERP55789 205 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 CCDC173Q0VFZ6 552 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 GPS1Q13098 491 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 EIF3IQ13347 325 aaKnown RBP17.84■□□□□ 0.45
DDX39A-212ENST00000590260 COL28A1Q2UY09 1125 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 PCID2Q5JVF3 399 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 PAPD7Q5XG87 772 aaKnown RBP17.84■□□□□ 0.45
DDX39A-212ENST00000590260 CAPRIN2Q6IMN6 1127 aaKnown RBP17.84■□□□□ 0.45
DDX39A-212ENST00000590260 LRRC8BQ6P9F7 803 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 WDR74Q6RFH5 385 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-212ENST00000590260 LDB1Q86U70 411 aaPredicted RBP17.84■□□□□ 0.45
DDX39A-212ENST00000590260 CREG2Q8IUH2 290 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 AGGF1Q8N302 714 aaeCLIP17.84■□□□□ 0.45
DDX39A-212ENST00000590260 MPP5Q8N3R9 675 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 OR10G6Q8NH81 332 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 RSC1A1Q92681 617 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 SH3KBP1Q96B97 665 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 NRTNQ99748 197 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 TRIM56Q9BRZ2 755 aaKnown RBP17.84■□□□□ 0.45
DDX39A-212ENST00000590260 PISDQ9UG56 409 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 SSUH2Q9Y2M2 353 aa17.84■□□□□ 0.45
DDX39A-212ENST00000590260 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.84■□□□□ 0.45
DDX39A-212ENST00000590260 MN1Q10571 1320 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-212ENST00000590260 C9orf172C9J069 976 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 C9P02748 559 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 POLBP06746 335 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 TYRP1P17643 537 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 PDHA2P29803 388 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 SLC5A2P31639 672 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 MAPK9P45984 424 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 PPP1CAP62136 330 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 CES3Q6UWW8 571 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 PACS1Q6VY07 963 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 CFAP206Q8IYR0 622 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 C17orf53Q8N3J3 647 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-212ENST00000590260 BMPERQ8N8U9 685 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 HM13Q8TCT9 377 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 HEXDCQ8WVB3 486 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 NCSTNQ92542 709 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 DCUN1D1Q96GG9 259 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 NAF1Q96HR8 494 aaKnown RBP17.83■□□□□ 0.44
DDX39A-212ENST00000590260 SGSM3Q96HU1 749 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-212ENST00000590260 OR52A5Q9H2C5 316 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 STN1Q9H668 368 aaKnown RBP17.83■□□□□ 0.44
DDX39A-212ENST00000590260 COG4Q9H9E3 785 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 THSD1Q9NS62 852 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 OCIAD1Q9NX40 245 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 FOXJ2Q9P0K8 574 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 ACACAQ13085 2346 aa17.83■□□□□ 0.44
DDX39A-212ENST00000590260 URB1O60287 2271 aaKnown RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 UBXN7O94888 489 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 MTHFD1P11586 935 aaKnown RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 RBMS1P29558 406 aaKnown RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 MLLT3P42568 568 aaPredicted RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 PTGIRP43119 386 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 LEPRP48357 1165 aaKnown RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 NPY2RP49146 381 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 PCBP4P57723 403 aaKnown RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 GNG11P61952 73 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 TRA2AQ13595 282 aaKnown RBP eCLIP17.82■□□□□ 0.442e-7■□□□□ 10.9
DDX39A-212ENST00000590260 ITIH4Q14624 930 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 AFTPHQ6ULP2 937 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 TRIM48Q8IWZ4 208 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 SPACA3Q8IXA5 215 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 PPHLN1Q8NEY8 458 aaKnown RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 OR4L1Q8NH43 312 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 LKAAEAR1Q8TD35 194 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 ANP32BQ92688 251 aaKnown RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 PEX13Q92968 403 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 CXorf40BQ96DE9 158 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 MFSD3Q96ES6 412 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 AHCYL2Q96HN2 611 aaKnown RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 CCM2Q9BSQ5 444 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 KIFC1Q9BW19 673 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 DDX47Q9H0S4 455 aaKnown RBP17.82■□□□□ 0.44
DDX39A-212ENST00000590260 PCDHGA7Q9Y5G6 932 aa17.82■□□□□ 0.44
DDX39A-212ENST00000590260 PIKFYVEQ9Y2I7 2098 aa17.81■□□□□ 0.44
DDX39A-212ENST00000590260 C17orf113A0A1B0GUU1 675 aa17.81■□□□□ 0.44
DDX39A-212ENST00000590260 A8MU76 341 aa17.81■□□□□ 0.44
DDX39A-212ENST00000590260 CFAP99D6REC4 459 aa17.81■□□□□ 0.44
DDX39A-212ENST00000590260 HGSO14964 777 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms