RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 PLCL1Q15111 1095 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 CT47A1Q5JQC4 288 aaPredicted RBP12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 LYPLAL1Q5VWZ2 237 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 IGFL3Q6UXB1 125 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 Q6ZS92 163 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 IRF2BP2Q7Z5L9 587 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 FJX1Q86VR8 437 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 KMT5CQ86Y97 462 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 TRAPPC5Q8IUR0 188 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 RBM12BQ8IXT5 1001 aaKnown RBP12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 GALNT16Q8N428 558 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 CCHCR1Q8TD31 782 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 NAT14Q8WUY8 206 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 CLIP3Q96DZ5 547 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 LURAP1Q96LR2 239 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 LRFN5Q96NI6 719 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 ZFYVE1Q9HBF4 777 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 HRASLS2Q9NWW9 162 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 GPR89AB7ZAQ6 455 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 AURKAO14965 403 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 MATN3O15232 486 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 GPR89BP0CG08 455 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 BPIP17213 487 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 ZNF165P49910 485 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 CTSCP53634 463 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 RPL26P61254 145 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 GALNT2Q10471 571 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 MYBPC3Q14896 1274 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 HIF1AQ16665 826 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 ZXDCQ2QGD7 858 aaPredicted RBP12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 NCBP2-AS2Q69YL0 99 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 TRAM1L1Q8N609 369 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 NEK11Q8NG66 645 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 CPT1BQ92523 772 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 BTBD6Q96KE9 485 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 ZSCAN5AQ9BUG6 496 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 SOHLH2Q9NX45 425 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 MYO1AQ9UBC5 1043 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 RPL26L1Q9UNX3 145 aaKnown RBP12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 CNTRLQ7Z7A1 2325 aa12.44□□□□□ -0.42
PRKCSH-210ENST00000589990 DOCK10Q96BY6 2186 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 MYO7BQ6PIF6 2116 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 OR6C74A6NCV1 312 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 SLC9B1P1A6NJY1 282 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 TMEM150CB9EJG8 249 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 LDB2O43679 373 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 CNOT3O75175 753 aaKnown RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 ALOX12BO75342 701 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 ZBTB11O95625 1053 aaPredicted RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 SERPINB6P35237 376 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 PCK1P35558 622 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 DCDC1P59894 354 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 SLC25A11Q02978 314 aaKnown RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 TMEM115Q12893 351 aaPredicted RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 NFE2L1Q14494 772 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 ATP13A5Q4VNC0 1218 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 DCAF10Q5QP82 559 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 FKBP15Q5T1M5 1219 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 ZNF385CQ66K41 422 aaPredicted RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 TMC3Q7Z5M5 1100 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 CPNE8Q86YQ8 564 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 GRHL3Q8TE85 626 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 TRIB3Q96RU7 358 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 INSM2Q96T92 566 aaPredicted RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 CD180Q99467 661 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 CEP41Q9BYV8 373 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 NAT10Q9H0A0 1025 aaKnown RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 KLHL25Q9H0H3 589 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 ACTR5Q9H9F9 607 aaPredicted RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 BPIFA1Q9NP55 256 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 LATS2Q9NRM7 1088 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 IMP3Q9NV31 184 aaKnown RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 NOVA2Q9UNW9 492 aaKnown RBP12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 BTRCQ9Y297 605 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 ZNF711Q9Y462 761 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 SPO11Q9Y5K1 396 aa12.43□□□□□ -0.42
PRKCSH-210ENST00000589990 VEGFDO43915 354 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 POP7O75817 140 aaKnown RBP12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 FTLP02792 175 aaPredicted RBP12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 ATP1A3P13637 1013 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 POLR2CP19387 275 aaPredicted RBP12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 PBLDP30039 288 aaPredicted RBP12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 HALP42357 657 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 LMAN1P49257 510 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 ATP13A4Q4VNC1 1196 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 BOLA3Q53S33 107 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 E4F1Q66K89 784 aaPredicted RBP12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 KLHL35Q6PF15 583 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 RAB43Q86YS6 212 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 BEND7Q8N7W2 519 aaPredicted RBP12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 CNTD1Q8N815 330 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 RASGEF1AQ8N9B8 481 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 OR8K5Q8NH50 307 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 NFKBIL1Q9UBC1 381 aaPredicted RBP12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 COPG2Q9UBF2 871 aa12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 NIPBLQ6KC79 2804 aaeCLIP12.42□□□□□ -0.42
PRKCSH-210ENST00000589990 CCDC78A2IDD5 438 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms