RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	AK5	Q9Y6K8	562 aa		15.21	■□□□□ 0.02
DDX39A-209	ENST00000589318	KANSL1L	A0AUZ9	987 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	C16orf96	A6NNT2	1141 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	PRMT5	O14744	637 aa	Predicted RBP	15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	H2AFY	O75367	372 aa	Known RBP	15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	PDE5A	O76074	875 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	TSPAN12	O95859	305 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	ENO1	P06733	434 aa	Known RBP	15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	RBP1	P09455	135 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	ZNF30	P17039	623 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	AOC1	P19801	751 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	ATP5F1	P24539	256 aa	Predicted RBP	15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	VIPR1	P32241	457 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	EIF2D	P41214	584 aa	Known RBP	15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	MTHFR	P42898	656 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	RALGDS	Q12967	914 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	ADGRE1	Q14246	886 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	POM121L1P	Q3SYA9	428 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	GPR33	Q49SQ1	333 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	PARS2	Q7L3T8	475 aa	Known RBP	15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	SMRP1	Q8NCR6	262 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	CD200R1	Q8TD46	325 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	ALG9	Q9H6U8	611 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	TUBA8	Q9NY65	449 aa	Predicted RBP	15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	IKZF3	Q9UKT9	509 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	DNAJC16	Q9Y2G8	782 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	COMMD10	Q9Y6G5	202 aa		15.2	■□□□□ 0.02
DDX39A-209	ENST00000589318	hCG_2014768	A0A024R1R8	64 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	EDDM13	A0A1B0GTR0	161 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	TBC1D3B	A6NDS4	549 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	CCDC160	A6NGH7	325 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	IQCF5	A8MTL0	148 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	TMEM114	B3SHH9	223 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	OR6B1	O95007	311 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	KAT7	O95251	611 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	KIT	P10721	976 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	ZNF24	P17028	368 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	RPS3	P23396	243 aa	Known RBP eCLIP	15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	PRKAA2	P54646	552 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	NAGLU	P54802	743 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	AQP4	P55087	323 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	PLOD1	Q02809	727 aa	Predicted RBP	15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	ATP13A5	Q4VNC0	1218 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	OGFRL1	Q5TC84	451 aa	Predicted RBP	15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	HSD11B1L	Q7Z5J1	315 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	PATL1	Q86TB9	770 aa	Known RBP	15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	NXPE1	Q8N323	547 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	SIDT2	Q8NBJ9	832 aa	Known RBP	15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	PIWIL2	Q8TC59	973 aa	Known RBP	15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	FAM129B	Q96TA1	746 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	HAUS8	Q9BT25	410 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	CCDC106	Q9BWC9	280 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	SYTL2	Q9HCH5	934 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	PCDHB1	Q9Y5F3	818 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	PRSS21	Q9Y6M0	314 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	GOLGA8CP	A6NN73	597 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318		A8MT66	165 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	MATN2	O00339	956 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	SPINT1	O43278	529 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	VPS26A	O75436	327 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	SUPT3H	O75486	399 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	CHRNG	P07510	517 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	MMP12	P39900	470 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	IL12RB1	P42701	662 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	CCR10	P46092	362 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	CLCN7	P51798	805 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	MTTP	P55157	894 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	DNAJB13	P59910	316 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	GRIN2C	Q14957	1233 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	OR4D1	Q15615	310 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	NADK2	Q4G0N4	442 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	DPPA4	Q7L190	304 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	TTC7B	Q86TV6	843 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	RBFA	Q8N0V3	343 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	TRMT61B	Q9BVS5	477 aa	Known RBP	15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	DERL2	Q9GZP9	239 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	DRC3	Q9H069	523 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	FBRSL1	Q9HCM7	1045 aa	Known RBP	15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	ZDHHC4	Q9NPG8	344 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	PNPO	Q9NVS9	261 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	THAP10	Q9P2Z0	257 aa	Predicted RBP	15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318	TMPRSS11E	Q9UL52	423 aa		15.19	■□□□□ 0.02
DDX39A-209	ENST00000589318		A0A088AWK7	358 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318		H3BNX3	289 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	ZNF195	O14628	629 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	PRNP	P04156	253 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	CYP2A6	P11509	494 aa	Predicted RBP	15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	ZNF7	P17097	686 aa	Predicted RBP	15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	VARS	P26640	1264 aa	Known RBP	15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	GALK1	P51570	392 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	BTK	Q06187	659 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	ARHGEF7	Q14155	803 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	ITPRIPL2	Q3MIP1	535 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	LYPLAL1	Q5VWZ2	237 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	ZDHHC20	Q5W0Z9	365 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	KLHL35	Q6PF15	583 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	MAVS	Q7Z434	540 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	LSMEM2	Q8N112	164 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	TMIE	Q8NEW7	156 aa		15.18	■□□□□ 0.02
DDX39A-209	ENST00000589318	ZFP28	Q8NHY6	868 aa		15.18	■□□□□ 0.02

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