RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 EIF3BP55884 814 aaKnown RBP19.23■□□□□ 0.67
CIRBP-220ENST00000588917 RPA4Q13156 261 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 NAB1Q13506 487 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 SMAD1Q15797 465 aaKnown RBP19.23■□□□□ 0.67
CIRBP-220ENST00000588917 DEFB133Q30KQ1 61 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 C6orf132Q5T0Z8 1188 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 METRNLQ641Q3 311 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 OGFOD3Q6PK18 319 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 MICALCLQ6ZW33 695 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 NAXDQ8IW45 347 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 PNPLA1Q8N8W4 532 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 OR6C4Q8NGE1 309 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 HM13Q8TCT9 377 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 CDC42EP4Q9H3Q1 356 aaKnown RBP19.23■□□□□ 0.67
CIRBP-220ENST00000588917 OSGEPL1Q9H4B0 414 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 FBXO6Q9NRD1 293 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-220ENST00000588917 NINJ2Q9NZG7 142 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 PCOLCE2Q9UKZ9 415 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 KCNK6Q9Y257 313 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 DNAJC16Q9Y2G8 782 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 PRSS21Q9Y6M0 314 aa19.23■□□□□ 0.67
CIRBP-220ENST00000588917 FAM159BA6NKW6 160 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 SH3BP5O60239 455 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 LDOC1O95751 146 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-220ENST00000588917 CELA2BP08218 269 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-220ENST00000588917 GIMD1P0DJR0 217 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 CHRM3P20309 590 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 HALP42357 657 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 CD151P48509 253 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 PMS2P54278 862 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 PLA2G4EQ3MJ16 856 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 AGAP9Q5VTM2 703 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 AVL9Q8NBF6 648 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 FBF1Q8TES7 1133 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 ZDHHC1Q8WTX9 485 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 ASZ1Q8WWH4 475 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 BIRC8Q96P09 236 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 CYTH2Q99418 400 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 SPATS2LQ9NUQ6 558 aaKnown RBP19.22■□□□□ 0.67
CIRBP-220ENST00000588917 ST14Q9Y5Y6 855 aa19.22■□□□□ 0.67
CIRBP-220ENST00000588917 E5RI56 91 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 TRIM16O95361 564 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 F3P13726 295 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 CSRP1P21291 193 aaKnown RBP19.21■□□□□ 0.67
CIRBP-220ENST00000588917 PBLDP30039 288 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-220ENST00000588917 SKIV2L2P42285 1042 aaKnown RBP19.21■□□□□ 0.67
CIRBP-220ENST00000588917 TCEA2Q15560 299 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 UGT3A1Q6NUS8 523 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 ABRAXAS1Q6UWZ7 409 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 STRA8Q7Z7C7 330 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 PIP4P1Q86T03 277 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 ARL10Q8N8L6 244 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 ELMO1Q92556 727 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 CCDC97Q96F63 343 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-220ENST00000588917 CPNE1Q99829 537 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 FUT8Q9BYC5 575 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 CEP295Q9C0D2 2601 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 LATS2Q9NRM7 1088 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 KLHL42Q9P2K6 505 aa19.21■□□□□ 0.67
CIRBP-220ENST00000588917 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.21■□□□□ 0.67
CIRBP-220ENST00000588917 V9GYY5 206 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-220ENST00000588917 PLXNB3Q9ULL4 1909 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 A0A087WUV0 522 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-220ENST00000588917 KIR2DS5A0A0G2JLQ3 304 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 A0A0G2JNG1 304 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 PRR19A6NJB7 356 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 PDZK1P1A8MUH7 402 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 KIR2DS3K7RE56 304 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 TRIM38O00635 465 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 SIGLEC6O43699 453 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 SNX2O60749 519 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 APOA4P06727 396 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 FAM153BP0C7A2 387 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 VSNL1P62760 191 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 MPP1Q00013 466 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 NFE2L1Q14494 772 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 KIR2DS5Q14953 304 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 TMED2Q15363 201 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 FAM153CQ494X1 144 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 IYDQ6PHW0 289 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 CNSTQ6PJW8 725 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 OTOAQ7RTW8 1153 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 CTAGE3PQ8IX95 158 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 CNPY4Q8N129 248 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 KCNJ9Q92806 393 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 TMEM159Q96B96 161 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 APOLD1Q96LR9 279 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 PARD6BQ9BYG5 372 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 CAAP1Q9H8G2 361 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 RRAGDQ9NQL2 400 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-220ENST00000588917 GULP1Q9UBP9 304 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 FTSJ1Q9UET6 329 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 TBC1D29Q9UFV1 150 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 TMEM131Q92545 1883 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 USP24Q9UPU5 2620 aa19.2■□□□□ 0.66
CIRBP-220ENST00000588917 ZW10O43264 779 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 ACSL3O95573 720 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 CKMT2P17540 419 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 CD9P21926 228 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 NOVA1P51513 510 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms