RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 PIH1D1Q9NWS0 290 aaKnown RBP11.36□□□□□ -0.59
RFX1-204ENST00000588885 OCIAD1Q9NX40 245 aa11.36□□□□□ -0.59
RFX1-204ENST00000588885 ZNF624Q9P2J8 865 aaPredicted RBP11.36□□□□□ -0.59
RFX1-204ENST00000588885 FAM8A1Q9UBU6 413 aa11.36□□□□□ -0.59
RFX1-204ENST00000588885 NEU2Q9Y3R4 380 aa11.36□□□□□ -0.59
RFX1-204ENST00000588885 PCDHGA7Q9Y5G6 932 aa11.36□□□□□ -0.59
RFX1-204ENST00000588885 SCN8AQ9UQD0 1980 aa11.36□□□□□ -0.59
RFX1-204ENST00000588885 KIR2DS5A0A0G2JLQ3 304 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 A0A0G2JNG1 304 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 C5orf60A6NFR6 353 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 EFCAB7A8K855 629 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 GPR89AB7ZAQ6 455 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 C9orf172C9J069 976 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 BHMG1C9JSJ3 638 aaPredicted RBP11.35□□□□□ -0.59
RFX1-204ENST00000588885 KIR2DS3K7RE56 304 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 TK2O00142 265 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 NVLO15381 856 aaKnown RBP11.35□□□□□ -0.59
RFX1-204ENST00000588885 DUX1O43812 170 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 POP7O75817 140 aaKnown RBP11.35□□□□□ -0.59
RFX1-204ENST00000588885 PRAMEF1O95521 474 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 GAS8O95995 478 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 VIPP01282 170 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 IFNB1P01574 187 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 KRT14P02533 472 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 GPR89BP0CG08 455 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 THRAP10827 490 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 SLC2A4P14672 509 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 BRAFP15056 766 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 MSH3P20585 1137 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 IDSP22304 550 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 AKT1P31749 480 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 CSTF2P33240 577 aaKnown RBP eCLIP11.35□□□□□ -0.59
RFX1-204ENST00000588885 SLC19A1P41440 591 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 MLLT3P42568 568 aaPredicted RBP11.35□□□□□ -0.59
RFX1-204ENST00000588885 CLCNKAP51800 687 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 UBE2IP63279 158 aaKnown RBP11.35□□□□□ -0.59
RFX1-204ENST00000588885 GPLD1P80108 840 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 GUCY2DQ02846 1103 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 SQSTM1Q13501 440 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 KIR2DS5Q14953 304 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 PPP1R7Q15435 360 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 TAF1AQ15573 450 aaPredicted RBP11.35□□□□□ -0.59
RFX1-204ENST00000588885 PARP6Q2NL67 630 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 GLE1Q53GS7 698 aaKnown RBP11.35□□□□□ -0.59
RFX1-204ENST00000588885 LDLRAP1Q5SW96 308 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 FNBP1LQ5T0N5 605 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 DENND5AQ6IQ26 1287 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 GSTA5Q7RTV2 222 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 MAATS1Q7Z4T9 603 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 GSPT2Q8IYD1 628 aaKnown RBP11.35□□□□□ -0.59
RFX1-204ENST00000588885 AGBL5Q8NDL9 886 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 OR13C4Q8NGS5 318 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 BRSK1Q8TDC3 778 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 ART4Q93070 314 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 TMEM159Q96B96 161 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 RTP4Q96DX8 246 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 RNF31Q96EP0 1072 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 SGF29Q96ES7 293 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 TIMM29Q9BSF4 260 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 TRIM31Q9BZY9 425 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 DPH5Q9H2P9 285 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 ASB8Q9H765 288 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.35□□□□□ -0.59
RFX1-204ENST00000588885 ASIC3Q9UHC3 531 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 PSMD13Q9UNM6 376 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 DRG1Q9Y295 367 aaKnown RBP11.35□□□□□ -0.59
RFX1-204ENST00000588885 WDR37Q9Y2I8 494 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 SLC30A1Q9Y6M5 507 aa11.35□□□□□ -0.59
RFX1-204ENST00000588885 CCDC78A2IDD5 438 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 OR5K4A6NMS3 321 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 HGSO14964 777 aaPredicted RBP11.34□□□□□ -0.59
RFX1-204ENST00000588885 EFSO43281 561 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 CRTAMO95727 393 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 VCLP18206 1134 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 XRCC1P18887 633 aaPredicted RBP11.34□□□□□ -0.59
RFX1-204ENST00000588885 TERF1P54274 439 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 VSNL1P62760 191 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 VAC14Q08AM6 782 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 MSLNQ13421 630 aaPredicted RBP11.34□□□□□ -0.59
RFX1-204ENST00000588885 ITGA9Q13797 1035 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 SEPT6Q14141 434 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 CLCA4Q14CN2 919 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 CLPPQ16740 277 aaPredicted RBP11.34□□□□□ -0.59
RFX1-204ENST00000588885 TMEM164Q5U3C3 297 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 KIAA1614Q5VZ46 1190 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 CCDC81Q6ZN84 652 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 FAM83HQ6ZRV2 1179 aaPredicted RBP11.34□□□□□ -0.59
RFX1-204ENST00000588885 SYDE1Q6ZW31 735 aaPredicted RBP11.34□□□□□ -0.59
RFX1-204ENST00000588885 C11orf96Q7Z7L8 435 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 VASH2Q86V25 355 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 AMZ2Q86W34 360 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 CCDC89Q8N998 374 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 CXorf40BQ96DE9 158 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 CCNL2Q96S94 520 aaPredicted RBP11.34□□□□□ -0.59
RFX1-204ENST00000588885 CTRCQ99895 268 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.34□□□□□ -0.59
RFX1-204ENST00000588885 SLC39A1Q9NY26 324 aa11.34□□□□□ -0.59
RFX1-204ENST00000588885 ERVH48-1M5A8F1 160 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 PPFIA2O75334 1257 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 SRP72O76094 671 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms