RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 BTN3A1O00481 513 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 IGFALSP35858 605 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 BCL7AQ4VC05 210 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 ACSBG2Q5FVE4 666 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 PLEKHS1Q5SXH7 462 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 ATG16L1Q676U5 607 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 DOK6Q6PKX4 331 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 NAPRTQ6XQN6 538 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 CAMKK1Q8N5S9 505 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 DENND6BQ8NEG7 585 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 ASZ1Q8WWH4 475 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 ZNF317Q96PQ6 595 aaPredicted RBP21.9■■□□□ 1.1
ATG4D-209ENST00000588857 MYOCQ99972 504 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 IER2Q9BTL4 223 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 LGR4Q9BXB1 951 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 FZD3Q9NPG1 666 aa21.9■■□□□ 1.1
ATG4D-209ENST00000588857 EIF3FO00303 357 aaPredicted RBP21.89■■□□□ 1.09
ATG4D-209ENST00000588857 MYCLP1P12525 358 aaPredicted RBP21.89■■□□□ 1.09
ATG4D-209ENST00000588857 ENO3P13929 434 aaPredicted RBP21.89■■□□□ 1.09
ATG4D-209ENST00000588857 ZNF8P17098 575 aaPredicted RBP21.89■■□□□ 1.09
ATG4D-209ENST00000588857 HSPA14Q0VDF9 509 aa21.89■■□□□ 1.09
ATG4D-209ENST00000588857 SYTL3Q4VX76 610 aa21.89■■□□□ 1.09
ATG4D-209ENST00000588857 PIWIL4Q7Z3Z4 852 aaKnown RBP21.89■■□□□ 1.09
ATG4D-209ENST00000588857 FAM122AQ96E09 287 aa21.89■■□□□ 1.09
ATG4D-209ENST00000588857 CCDC126Q96EE4 140 aa21.89■■□□□ 1.09
ATG4D-209ENST00000588857 OXSMQ9NWU1 459 aa21.89■■□□□ 1.09
ATG4D-209ENST00000588857 WSB2Q9NYS7 404 aaPredicted RBP21.89■■□□□ 1.09
ATG4D-209ENST00000588857 TSR3Q9UJK0 312 aaKnown RBP21.89■■□□□ 1.09
ATG4D-209ENST00000588857 RNF112Q9ULX5 631 aa21.89■■□□□ 1.09
ATG4D-209ENST00000588857 GPR34Q9UPC5 381 aa21.89■■□□□ 1.09
ATG4D-209ENST00000588857 NPEPPSL1A6NEC2 478 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 CDC7O00311 574 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 FPGTO14772 594 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 KLF11O14901 512 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 LATO43561 262 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 HNRNPA2B1P22626 353 aaKnown RBP21.88■■□□□ 1.09
ATG4D-209ENST00000588857 ATP5F1P24539 256 aaPredicted RBP21.88■■□□□ 1.09
ATG4D-209ENST00000588857 PLA2G5P39877 138 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 CXCL12P48061 93 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 CCR5P51681 352 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 ASPHQ12797 758 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 TERF2Q15554 542 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 OR4D1Q15615 310 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 KIAA0895LQ68EN5 471 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 LRRC34Q8IZ02 419 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 FUBP1Q96AE4 644 aaKnown RBP21.88■■□□□ 1.09
ATG4D-209ENST00000588857 GPR174Q9BXC1 333 aa21.88■■□□□ 1.09
ATG4D-209ENST00000588857 C6orf106Q9H6K1 298 aaPredicted RBP21.88■■□□□ 1.09
ATG4D-209ENST00000588857 SYCE1LA8MT33 242 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 GPR89AB7ZAQ6 455 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 CACNB4O00305 520 aaPredicted RBP21.87■■□□□ 1.09
ATG4D-209ENST00000588857 DLX3O60479 287 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 TRIM13O60858 407 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 KERAO60938 352 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 SMIM24O75264 130 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 FSBPO95073 299 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 GPR89BP0CG08 455 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 MAGEA9P43362 315 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 PXNP49023 591 aaPredicted RBP21.87■■□□□ 1.09
ATG4D-209ENST00000588857 PRKAA2P54646 552 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 NHLH1Q02575 133 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 TSNQ15631 228 aaKnown RBP21.87■■□□□ 1.09
ATG4D-209ENST00000588857 CPLX4Q7Z7G2 160 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 RLN3Q8WXF3 142 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 FOXJ1Q92949 421 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 EXT2Q93063 718 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 APOOQ9BUR5 198 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 FAM107BQ9H098 131 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 IRF2BPLQ9H1B7 796 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 KMT2EQ8IZD2 1858 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 H2AFYO75367 372 aaKnown RBP21.87■■□□□ 1.09
ATG4D-209ENST00000588857 GSTM1P09488 218 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 TPBGLP0DKB5 382 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 FGF3P11487 239 aaPredicted RBP21.87■■□□□ 1.09
ATG4D-209ENST00000588857 GRK2P25098 689 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 PBLDP30039 288 aaPredicted RBP21.87■■□□□ 1.09
ATG4D-209ENST00000588857 AKT2P31751 481 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 KCNC1P48547 511 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 CCR3P51677 355 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 GSTM4Q03013 218 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 STX3Q13277 289 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 LIPMQ5VYY2 423 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 CRTC3Q6UUV7 619 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 SKA2Q8WVK7 121 aaPredicted RBP21.87■■□□□ 1.09
ATG4D-209ENST00000588857 TMEM159Q96B96 161 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 ATOH8Q96SQ7 321 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 NSRP1Q9H0G5 558 aaKnown RBP21.87■■□□□ 1.09
ATG4D-209ENST00000588857 RABEP2Q9H5N1 569 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 FAM8A1Q9UBU6 413 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 IKZF3Q9UKT9 509 aa21.87■■□□□ 1.09
ATG4D-209ENST00000588857 IGHV1OR15-9A0A0B4J2B8 117 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 CHUKO15111 745 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 NUAK1O60285 661 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 LILRB5O75023 590 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 SERPINE1P05121 402 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 GBX1Q14549 363 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 ZCCHC23Q6ZST2 131 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 FAM47EQ6ZV65 393 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 FRA10AC1Q70Z53 315 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 ADAMTSL2Q86TH1 951 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms