RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 PSAT1Q9Y617 370 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 CXorf49A8MYA2 514 aaPredicted RBP18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 TM4SF5O14894 197 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 KCNJ13O60928 360 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 ACSL3O95573 720 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 ESR1P03372 595 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 MYF5P13349 255 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 ABCG1P45844 678 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 SLMAPQ14BN4 828 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 SEPT7Q16181 437 aaKnown RBP18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 ZNF549Q6P9A3 640 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 NAPRTQ6XQN6 538 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 KIAA0408Q6ZU52 694 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 SLC35F3Q8IY50 421 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 KYQ8NBH2 561 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 DEFB124Q8NES8 71 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 HM13Q8TCT9 377 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 PATE1Q8WXA2 126 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 APOLD1Q96LR9 279 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 PRDM8Q9NQV8 689 aa18.63■□□□□ 0.57
CLPTM1-209ENST00000588855 SPEGQ15772 3267 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 C17orf113A0A1B0GUU1 675 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 A6NCN8 305 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 FAM159BA6NKW6 160 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 NOBOXO60393 691 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 NIPSNAP2O75323 286 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 TRIM16O95361 564 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 AHSGP02765 367 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 PKMP14618 531 aaKnown RBP18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 RPL10P27635 214 aaKnown RBP18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 STX2P32856 288 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 PROX2Q3B8N5 592 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 ZNF449Q6P9G9 518 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 CCNI2Q6ZMN8 369 aaPredicted RBP18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 CYS1Q717R9 158 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 CFAP206Q8IYR0 622 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 NAGSQ8N159 534 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 ELMO1Q92556 727 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 CNDP2Q96KP4 475 aaKnown RBP18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 COG4Q9H9E3 785 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 FTSJ1Q9UET6 329 aa18.62■□□□□ 0.57
CLPTM1-209ENST00000588855 LY6G6EA0A0G2JKS1 128 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 KLHL33A6NCF5 533 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 PDZK1P1A8MUH7 402 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 F8W8V4 182 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 IDSP22304 550 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 BOP1Q14137 746 aaKnown RBP18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 NAA30Q147X3 362 aaPredicted RBP18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 EFTUD2Q15029 972 aaKnown RBP eCLIP18.61■□□□□ 0.573e-6■■■■■ 32.7
CLPTM1-209ENST00000588855 KBTBD12Q3ZCT8 623 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 METRNLQ641Q3 311 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 GALNT7Q86SF2 657 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 SLC26A11Q86WA9 606 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 ARL10Q8N8L6 244 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 FAM181AQ8N9Y4 354 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 CDKL2Q92772 493 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 FAM136AQ96C01 138 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 TSSK1BQ9BXA7 367 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 TXLNGYQ9BZA5 131 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 SCHIP1Q9P0W5 487 aaPredicted RBP18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 WDR37Q9Y2I8 494 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 U3KQA8 63 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 PCNX2A6NKB5 2137 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 DCHS1Q96JQ0 3298 aa18.61■□□□□ 0.57
CLPTM1-209ENST00000588855 LDOC1O95751 146 aaPredicted RBP18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 GSTM1P09488 218 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 F3P13726 295 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 BRAFP15056 766 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 HOXD11P31277 338 aaPredicted RBP18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 CCR7P32248 378 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 PHBP35232 272 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 PREPP48147 710 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 CD151P48509 253 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 GSTM4Q03013 218 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 BRD3Q15059 726 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 WDR93Q6P2C0 686 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 OGFOD3Q6PK18 319 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 STRA8Q7Z7C7 330 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 GPR156Q8NFN8 814 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 PANX3Q96QZ0 392 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 NDNQ99608 321 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 CCDC68Q9H2F9 335 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 NSMCE4AQ9NXX6 385 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 PSMD13Q9UNM6 376 aa18.6■□□□□ 0.57
CLPTM1-209ENST00000588855 TRBV23OR9-2A0A075B6M9 112 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 H3BMM5 538 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 PMS2P54278 862 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 CSE1LP55060 971 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 MAZP56270 477 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 SYTL3Q4VX76 610 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 C14orf28Q4W4Y0 310 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 RBM20Q5T481 1227 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 CTAGE3PQ8IX95 158 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 PPM1NQ8N819 430 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 SLC37A2Q8TED4 501 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 GLMNQ92990 594 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 ATXN7L3BQ96GX2 97 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 AARSD1Q9BTE6 412 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 GALPQ9UBC7 116 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms