RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 APOLD1Q96LR9 279 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 COPS8Q99627 209 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 FAM96AQ9H5X1 160 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 ST14Q9Y5Y6 855 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 SPEGQ15772 3267 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 SPAARA0A1B0GVQ0 90 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 OR51F1A6NGY5 319 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 KMOO15229 486 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 GOT2P00505 430 aaKnown RBP19.84■□□□□ 0.77
ATG4D-208ENST00000588667 RALBP11234 206 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 CKMT2P17540 419 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 ACRV1P26436 265 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 AK4P27144 223 aaPredicted RBP19.84■□□□□ 0.77
ATG4D-208ENST00000588667 NMBRP28336 390 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 CBX1P83916 185 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 MGAT5Q09328 741 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 SLC30A9Q6PML9 568 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 CRTC3Q6UUV7 619 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 CES3Q6UWW8 571 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 SERPINA9Q86WD7 417 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 TRAPPC5Q8IUR0 188 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 ZNF547Q8IVP9 402 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 PIANPQ8IYJ0 282 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 CNPY4Q8N129 248 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 ARL10Q8N8L6 244 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 RASGEF1AQ8N9B8 481 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 FAM46DQ8NEK8 389 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 OR6P1Q8NGX9 317 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 HEXDCQ8WVB3 486 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 DCAKDQ8WVC6 231 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.84■□□□□ 0.77
ATG4D-208ENST00000588667 MFSD3Q96ES6 412 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 DCUN1D1Q96GG9 259 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 FCRL3Q96P31 734 aaPredicted RBP19.84■□□□□ 0.77
ATG4D-208ENST00000588667 EVA1BQ9NVM1 165 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 ZDHHC3Q9NYG2 299 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 TAAR2Q9P1P5 351 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 ZNF180Q9UJW8 692 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 GPR34Q9UPC5 381 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 PLEKHM1Q9Y4G2 1056 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 RP1P56715 2156 aa19.83■□□□□ 0.77
ATG4D-208ENST00000588667 IGLV3-16A0A075B6K0 115 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 ZCWPW2A0A1B0GU75 182 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 CFAP99D6REC4 459 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 RRP9O43818 475 aaKnown RBP19.83■□□□□ 0.76
ATG4D-208ENST00000588667 CKMT1AP12532 417 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 ACP5P13686 325 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 PAMP19021 973 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 ACTR1BP42025 376 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 CDKN1CP49918 316 aaPredicted RBP19.83■□□□□ 0.76
ATG4D-208ENST00000588667 ACTR1AP61163 376 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 DAB2P98082 770 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 LGSNQ5TDP6 509 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 MICALCLQ6ZW33 695 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 TAS2R42Q7RTR8 314 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 OR4L1Q8NH43 312 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 ZNF514Q96K75 400 aaPredicted RBP19.83■□□□□ 0.76
ATG4D-208ENST00000588667 TIMM29Q9BSF4 260 aa19.83■□□□□ 0.76
ATG4D-208ENST00000588667 LY6G6EA0A0G2JKS1 128 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 IQANK1A0A1B0GTG1 560 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 PIAS1O75925 651 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 PRSS56P0CW18 603 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 KRT15P19012 456 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 HPDP32754 393 aaPredicted RBP19.82■□□□□ 0.76
ATG4D-208ENST00000588667 RPIAP49247 311 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 B4GALNT1Q00973 533 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 SLC35F3Q8IY50 421 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 CYP4X1Q8N118 509 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 DPEP2Q9H4A9 486 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 SMYD2Q9NRG4 433 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 TOR4AQ9NXH8 423 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 SENP1Q9P0U3 644 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 ZFATQ9P243 1243 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 ACTL7BQ9Y614 415 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 U3KQA8 63 aa19.82■□□□□ 0.76
ATG4D-208ENST00000588667 CXorf49A8MYA2 514 aaPredicted RBP19.81■□□□□ 0.76
ATG4D-208ENST00000588667 ACP1P24666 158 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 ACADVLP49748 655 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 DUSP3P51452 185 aaPredicted RBP19.81■□□□□ 0.76
ATG4D-208ENST00000588667 CTSCP53634 463 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 DNAJC3Q13217 504 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 ITIH4Q14624 930 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 NR0B2Q15466 257 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 DBN1Q16643 649 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 INSCQ1MX18 579 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 LYPLAL1Q5VWZ2 237 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 KIAA0930Q6ICG6 404 aaPredicted RBP19.81■□□□□ 0.76
ATG4D-208ENST00000588667 CERS6Q6ZMG9 384 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 C11orf96Q7Z7L8 435 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 KYQ8NBH2 561 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 TTC1Q99614 292 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 C20orf96Q9NUD7 363 aaPredicted RBP19.81■□□□□ 0.76
ATG4D-208ENST00000588667 SPATS2LQ9NUQ6 558 aaKnown RBP19.81■□□□□ 0.76
ATG4D-208ENST00000588667 SIRPGQ9P1W8 387 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 APOBEC2Q9Y235 224 aaKnown RBP19.81■□□□□ 0.76
ATG4D-208ENST00000588667 KCNK6Q9Y257 313 aa19.81■□□□□ 0.76
ATG4D-208ENST00000588667 OR2AG2A6NM03 316 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 B4DGG1 531 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 KRT37O76014 449 aa19.8■□□□□ 0.76
ATG4D-208ENST00000588667 FTH1P19P0C7X4 201 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms