RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PLCD4Q9BRC7 762 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 LGR4Q9BXB1 951 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 EPN3Q9H201 632 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 P2RY12Q9H244 342 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 SMOC1Q9H4F8 434 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 NMRAL1Q9HBL8 299 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 CAPN10Q9HC96 672 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 GPAMQ9HCL2 828 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 FSCN3Q9NQT6 498 aa12.47□□□□□ -0.41
VMP1-202ENST00000585847 FBXO6Q9NRD1 293 aaPredicted RBP12.47□□□□□ -0.41
VMP1-202ENST00000585847 MARCH4Q9P2E8 410 aaPredicted RBP12.47□□□□□ -0.41
VMP1-202ENST00000585847 PNMA8BQ9ULN7 279 aaPredicted RBP12.47□□□□□ -0.41
VMP1-202ENST00000585847 OAS3Q9Y6K5 1087 aaKnown RBP12.47□□□□□ -0.41
VMP1-202ENST00000585847 TDRD6O60522 2096 aaKnown RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 A0A1B0GTW7 788 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 OR51F1A6NGY5 319 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 GOLGA8TH3BQL2 631 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 BCAT2O15382 392 aaPredicted RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 PLIN3O60664 434 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 HAUS5O94927 633 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 FAM107AO95990 144 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 SLC35E2BP0CK96 405 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 CBSLP0DN79 551 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 ENO3P13929 434 aaPredicted RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 RPA3P35244 121 aaPredicted RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 CBSP35520 551 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 MPLP40238 635 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 SERPINB4P48594 390 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 CSNK1EP49674 416 aaKnown RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 RGS4P49798 205 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 CBX1P83916 185 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 PDAP1Q13442 181 aaKnown RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 ACAP2Q15057 778 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 CHRNA6Q15825 494 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 LVRNQ6Q4G3 990 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 FAM151BQ6UXP7 276 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 TAS2R42Q7RTR8 314 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 PHYKPLQ8IUZ5 450 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 PNPLA1Q8N8W4 532 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 ANKRD42Q8N9B4 389 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 MFSD2AQ8NA29 543 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 RHEBL1Q8TAI7 183 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 LRRC8CQ8TDW0 803 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 CCDC97Q96F63 343 aaPredicted RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 DCUN1D1Q96GG9 259 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 COX14Q96I36 57 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 UBXN10Q96LJ8 280 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 SIKE1Q9BRV8 207 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 APOOQ9BUR5 198 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 TEX101Q9BY14 249 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 MRPL46Q9H2W6 279 aaKnown RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 SUDS3Q9H7L9 328 aaPredicted RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 IL1RAPL1Q9NZN1 696 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 SIRPGQ9P1W8 387 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 TRMT6Q9UJA5 497 aaKnown RBP12.46□□□□□ -0.41
VMP1-202ENST00000585847 PCDHGA5Q9Y5G8 931 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 KNL1Q8NG31 2342 aa12.46□□□□□ -0.41
VMP1-202ENST00000585847 CHD8Q9HCK8 2581 aa12.46□□□□□ -0.42
VMP1-202ENST00000585847 A0A1B0GVT2 93 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 GMNCA6NCL1 334 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 SYCE1LA8MT33 242 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 E5RI56 91 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 FPGTO14772 594 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 VILLO15195 856 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 SPAG7O75391 227 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 PIAS1O75925 651 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 WISP3O95389 354 aaPredicted RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 FTH1P02794 183 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 FUCA1P04066 466 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 LTA4HP09960 611 aaKnown RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 OR56A5P0C7T3 313 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 ZNF37AP17032 561 aaPredicted RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 UGT1A6P19224 532 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 TAC1P20366 129 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 UGT1A1P22309 533 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 UGT1A4P22310 534 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 CD38P28907 300 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 ALDH3A1P30838 453 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 HOXD12P35452 270 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 UGT1A3P35503 534 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 UGT1A5P35504 534 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 GPR1P46091 355 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 CDKN1CP49918 316 aaPredicted RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 HK2P52789 917 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 TAS2R39P59534 338 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 GUCY1A3Q02108 690 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 PLOD1Q02809 727 aaPredicted RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 TERF2Q15554 542 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 AASDHQ4L235 1098 aaPredicted RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 ATP13A5Q4VNC0 1218 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 KHDC1Q4VXA5 237 aaKnown RBP12.45□□□□□ -0.42
VMP1-202ENST00000585847 RAET1GQ6H3X3 334 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 TCEAL6Q6IPX3 200 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 SLC23A3Q6PIS1 610 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 CNSTQ6PJW8 725 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 ADAMTSL4Q6UY14 1074 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 Q6ZSR6 202 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 TAX1BP1Q86VP1 789 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 IQCHQ86VS3 1027 aa12.45□□□□□ -0.42
VMP1-202ENST00000585847 SERPINA9Q86WD7 417 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms