RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 DHRS4Q9BTZ2 278 aa13.04□□□□□ -0.32
COPS3-218ENST00000584216 SLC7A5P2Q9GIP4 190 aa13.04□□□□□ -0.32
COPS3-218ENST00000584216 AGPAT4Q9NRZ5 378 aa13.04□□□□□ -0.32
COPS3-218ENST00000584216 IMP3Q9NV31 184 aaKnown RBP13.04□□□□□ -0.32
COPS3-218ENST00000584216 ASF1BQ9NVP2 202 aa13.04□□□□□ -0.32
COPS3-218ENST00000584216 BTRCQ9Y297 605 aa13.04□□□□□ -0.32
COPS3-218ENST00000584216 DOPEY1Q5JWR5 2465 aa13.04□□□□□ -0.32
COPS3-218ENST00000584216 ESPL1Q14674 2120 aa13.04□□□□□ -0.32
COPS3-218ENST00000584216 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 KCNK1O00180 336 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 HNRNPRO43390 633 aaKnown RBP13.03□□□□□ -0.32
COPS3-218ENST00000584216 HBQ1P09105 142 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 PIRTP0C851 137 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 MTHFD1P11586 935 aaKnown RBP13.03□□□□□ -0.32
COPS3-218ENST00000584216 CYP2A7P20853 494 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 AGXTP21549 392 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 TNNT3P45378 269 aaPredicted RBP13.03□□□□□ -0.32
COPS3-218ENST00000584216 IFI35P80217 286 aaPredicted RBP13.03□□□□□ -0.32
COPS3-218ENST00000584216 CDK18Q07002 472 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 NCF4Q15080 339 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 SLC14A2Q15849 920 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 KYNUQ16719 465 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 LDLRAP1Q5SW96 308 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 CERS6Q6ZMG9 384 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 NT5DC3Q86UY8 548 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 SRRM1Q8IYB3 904 aaKnown RBP13.03□□□□□ -0.32
COPS3-218ENST00000584216 SYTL1Q8IYJ3 562 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 CISD2Q8N5K1 135 aaKnown RBP13.03□□□□□ -0.32
COPS3-218ENST00000584216 SLC38A9Q8NBW4 561 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 DTX3LQ8TDB6 740 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 RUBCNLQ9H714 662 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 ACTR5Q9H9F9 607 aaPredicted RBP13.03□□□□□ -0.32
COPS3-218ENST00000584216 COPG1Q9Y678 874 aaKnown RBP13.03□□□□□ -0.32
COPS3-218ENST00000584216 ITPR2Q14571 2701 aa13.03□□□□□ -0.32
COPS3-218ENST00000584216 PEX12O00623 359 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 POP7O75817 140 aaKnown RBP13.02□□□□□ -0.33
COPS3-218ENST00000584216 CD63P08962 238 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 MSL3P1P0C860 447 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 PYGMP11217 842 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 RORAP35398 523 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 GJC1P36383 396 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 HADHAP40939 763 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 ARSEP51690 589 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 GBE1Q04446 702 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.33
COPS3-218ENST00000584216 ATP1A4Q13733 1029 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 PCSK7Q16549 785 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 STX1AQ16623 288 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 PLEKHN1Q494U1 663 aaPredicted RBP13.02□□□□□ -0.33
COPS3-218ENST00000584216 FILIP1LQ4L180 1135 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 ATP13A5Q4VNC0 1218 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 KHDC1Q4VXA5 237 aaKnown RBP13.02□□□□□ -0.33
COPS3-218ENST00000584216 IGFL3Q6UXB1 125 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 APTXQ7Z2E3 356 aaKnown RBP13.02□□□□□ -0.33
COPS3-218ENST00000584216 ZBTB2Q8N680 514 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 IMP4Q96G21 291 aaKnown RBP13.02□□□□□ -0.33
COPS3-218ENST00000584216 BTBD6Q96KE9 485 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 THAP2Q9H0W7 228 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 TRABDQ9H4I3 376 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 LCMT1Q9UIC8 334 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 SERTAD3Q9UJW9 196 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 PSMD13Q9UNM6 376 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 BZW2Q9Y6E2 419 aaKnown RBP13.02□□□□□ -0.33
COPS3-218ENST00000584216 COLEC10Q9Y6Z7 277 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 SHANK1Q9Y566 2161 aa13.02□□□□□ -0.33
COPS3-218ENST00000584216 OR6C74A6NCV1 312 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 NDST3O95803 873 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 SLC35G4P0C7Q5 338 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 HLA-DPA1P20036 260 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 CDH3P22223 829 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 NDUFS1P28331 727 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 HMGCLP35914 325 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 ZBTB17Q13105 803 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 RAPSNQ13702 412 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 ITGA9Q13797 1035 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 KRT33BQ14525 404 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 MYBPC3Q14896 1274 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 METRNLQ641Q3 311 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 FAM198BQ6UWH4 519 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 ZADH2Q8N4Q0 377 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 CNTD1Q8N815 330 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 ST6GALNAC3Q8NDV1 305 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 UBE2Q2Q8WVN8 375 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 C12orf66Q96MD2 445 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 TLR10Q9BXR5 811 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 SLC25A51Q9H1U9 297 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 KIR3DX1Q9H7L2 352 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 PCMTD2Q9NV79 361 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 CHMP5Q9NZZ3 219 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 SLC24A2Q9UI40 661 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 ACSL5Q9ULC5 683 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 ENTPD4Q9Y227 616 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 HEBP2Q9Y5Z4 205 aa13.01□□□□□ -0.33
COPS3-218ENST00000584216 TNRC6AQ8NDV7 1962 aaKnown RBP13.01□□□□□ -0.33
COPS3-218ENST00000584216 TMEM150CB9EJG8 249 aa13□□□□□ -0.33
COPS3-218ENST00000584216 PPP1R12AO14974 1030 aaPredicted RBP13□□□□□ -0.33
COPS3-218ENST00000584216 CYP1A2P05177 515 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms