RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CCL4P13236 92 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 CD1EP15812 388 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 VCLP18206 1134 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 HLA-DPA1P20036 260 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 CD68P34810 354 aaPredicted RBP10.94□□□□□ -0.66
CCDC47-206ENST00000584112 CETN2P41208 172 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 TSPAN7P41732 249 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 MPP3Q13368 585 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 XRCC4Q13426 336 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 GTF2H3Q13889 308 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 SIRPB2Q5JXA9 342 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 FAM182AQ5T1J6 154 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 CCDC181Q5TID7 509 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 BBS12Q6ZW61 710 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF761Q86XN6 746 aaPredicted RBP10.94□□□□□ -0.66
CCDC47-206ENST00000584112 FAM129CQ86XR2 697 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 TMTC1Q8IUR5 882 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 TRIM48Q8IWZ4 208 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF567Q8N184 647 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 DTX3LQ8TDB6 740 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 BRSK1Q8TDC3 778 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 HAUS1Q96CS2 278 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 MRFAP1L1Q96HT8 127 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 TTC25Q96NG3 672 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 TEFMQ96QE5 360 aaKnown RBP10.94□□□□□ -0.66
CCDC47-206ENST00000584112 TIMM29Q9BSF4 260 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 DDA1Q9BW61 102 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 FSD1LQ9BXM9 530 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 SLC29A3Q9BZD2 475 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 ZCCHC2Q9C0B9 1178 aaKnown RBP10.94□□□□□ -0.66
CCDC47-206ENST00000584112 UCK1Q9HA47 277 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 ARFGAP3Q9NP61 516 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 CPNE7Q9UBL6 633 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 SPO11Q9Y5K1 396 aa10.94□□□□□ -0.66
CCDC47-206ENST00000584112 EPN1Q9Y6I3 576 aaPredicted RBP10.94□□□□□ -0.66
CCDC47-206ENST00000584112 FLNAP21333 2647 aaKnown RBP10.94□□□□□ -0.66
CCDC47-206ENST00000584112 H7C0C1 242 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 AURKAO14965 403 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF189O75820 626 aaPredicted RBP10.93□□□□□ -0.66
CCDC47-206ENST00000584112 CDK14O94921 469 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 NDUFA10O95299 355 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF7P17097 686 aaPredicted RBP10.93□□□□□ -0.66
CCDC47-206ENST00000584112 XRCC1P18887 633 aaPredicted RBP10.93□□□□□ -0.66
CCDC47-206ENST00000584112 MPSTP25325 297 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 CTNNA1P35221 906 aaKnown RBP10.93□□□□□ -0.66
CCDC47-206ENST00000584112 SPAM1P38567 509 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 ATP5OP48047 213 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 MARCKSL1P49006 195 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 UBE2IP63279 158 aaKnown RBP10.93□□□□□ -0.66
CCDC47-206ENST00000584112 ADCY2Q08462 1091 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 SLC1A5Q15758 541 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 ATP13A5Q4VNC0 1218 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF648Q5T619 568 aaPredicted RBP10.93□□□□□ -0.66
CCDC47-206ENST00000584112 DCAF12Q5T6F0 453 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 ITPRIPL1Q6GPH6 555 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 C16orf46Q6P387 395 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 CRTC3Q6UUV7 619 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 GLT6D1Q7Z4J2 308 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 ARHGAP22Q7Z5H3 698 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 PLXDC1Q8IUK5 500 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 SLC25A41Q8N5S1 370 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 IPMKQ8NFU5 416 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 GDAP1Q8TB36 358 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 NCSTNQ92542 709 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 KRT35Q92764 455 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 ART4Q93070 314 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 C19orf60Q96EN9 201 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 SLC45A3Q96JT2 553 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 MRGPRX2Q96LB1 330 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 HEMGNQ9BXL5 484 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 BPIFA1Q9NP55 256 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
CCDC47-206ENST00000584112 SLC39A1Q9NY26 324 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 TMEM9Q9P0T7 183 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 RSPH14Q9UHP6 348 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 EFR3BQ9Y2G0 817 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 PKP3Q9Y446 797 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 PCDHA3Q9Y5H8 950 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 KCNMB2Q9Y691 235 aa10.93□□□□□ -0.66
CCDC47-206ENST00000584112 MACROD2A1Z1Q3 448 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 CCDC66A2RUB6 948 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 PDZK1P1A8MUH7 402 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 BTNL10A8MVZ5 291 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 KRT86O43790 486 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 KCNJ13O60928 360 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 ANXA9O76027 345 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 STK10O94804 968 aaKnown RBP10.92□□□□□ -0.66
CCDC47-206ENST00000584112 VIPP01282 170 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 IDSP22304 550 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 FECHP22830 423 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 CTNNA2P26232 953 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 PTPN7P35236 360 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 MAPK9P45984 424 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF75DP51815 510 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 GEMP55040 296 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 NAP1L1P55209 391 aaKnown RBP10.92□□□□□ -0.66
CCDC47-206ENST00000584112 LTBQ06643 244 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 TMEM115Q12893 351 aaPredicted RBP10.92□□□□□ -0.66
CCDC47-206ENST00000584112 ITGA9Q13797 1035 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 NOMO1Q15155 1222 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms