RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	SIGLEC16	A6NMB1	481 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	REM1	O75628	298 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	SLC22A3	O75751	556 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	MT-ND1	P03886	318 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	INHA	P05111	366 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ITGAV	P06756	1048 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	TYRP1	P17643	537 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	RNF144A	P50876	292 aa	Predicted RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	SELENOV	P59797	346 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	DCTN2	Q13561	401 aa	Known RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	LPAL2	Q16609	132 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	CITED4	Q96RK1	184 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	CRTAC1	Q9NQ79	661 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	GRIN2D	O15399	1336 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705		A0A087WXM4	84 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705		A0A1W2PRU2	124 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705		C9IYK1	514 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	B4GALT2	O60909	372 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	PAPSS2	O95340	614 aa	Predicted RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ACP5	P13686	325 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	CFL1	P23528	166 aa	Known RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	GJA9	P57773	515 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	PTEN	P60484	403 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	NFKB2	Q00653	900 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	MED27	Q6P2C8	311 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	FIP1L1	Q6UN15	594 aa	Known RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ZNF570	Q96NI8	536 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	KCTD5	Q9NXV2	234 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	TNFRSF10B	O14763	440 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	PRR5	P85299	388 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ELOA3B	Q3SY89	546 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	C9orf57	Q5W0N0	161 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	GPAT4	Q86UL3	456 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ELOA3	Q8NG57	546 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	KCNS2	Q9ULS6	477 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	PCDHGC4	Q9Y5F7	938 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	AZIN1	O14977	448 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	PEX10	O60683	326 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	C8A	P07357	584 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ACTR1B	P42025	376 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ACTR1A	P61163	376 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	TXNDC11	Q6PKC3	985 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ANKRD52	Q8NB46	1076 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	MR1	Q95460	341 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ZSWIM3	Q96MP5	696 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	DNAJC18	Q9H819	358 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	LRTM1	Q9HBL6	345 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	AP3M1	Q9Y2T2	418 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	PMF1-BGLAP	U3KQ54	211 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	PRAMEF1	O95521	474 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	CSTB	P04080	98 aa	Known RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	ANXA4	P09525	319 aa	Predicted RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	NCBP2	P52298	156 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	LRRC32	Q14392	662 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	DCST1	Q5T197	706 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	QSOX2	Q6ZRP7	698 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	HDAC7	Q8WUI4	952 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	NOL11	Q9H8H0	719 aa	Known RBP	11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	SAMD9L	Q8IVG5	1584 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	CAPN14	A8MX76	684 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	LCA5L	O95447	670 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	COX4I1	P13073	169 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	MAP3K8	P41279	467 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	PSME3	P61289	254 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	FOXK1	P85037	733 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	FPGS	Q05932	587 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	GRM3	Q14832	879 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	SCGB2B2	Q4G0G5	96 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	GK5	Q6ZS86	529 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	TCEAL3	Q969E4	200 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	DDX20	Q9UHI6	824 aa	Known RBP	11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	PLA2R1	Q13018	1463 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705		A0A0J9YVX5	310 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	MRPS5	P82675	430 aa	Known RBP	11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	MAMLD1	Q13495	774 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	TAS1R3	Q7RTX0	852 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	ZNF101	Q8IZC7	436 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	ZFR	Q96KR1	1074 aa	Known RBP	11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	MGME1	Q9BQP7	344 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	TTYH2	Q9BSA4	534 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	TCF7L1	Q9HCS4	588 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	ADAP2	Q9NPF8	381 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.16	□□□□□ -0.62
MSI2-217	ENST00000583705		E7ENQ6	273 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705		E9PAM4	449 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	AP5Z1	O43299	807 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	UROS	P10746	265 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	ALYREF	Q86V81	257 aa	Known RBP	11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	CAND1	Q86VP6	1230 aa	Known RBP	11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	OXR1	Q8N573	874 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	PROKR2	Q8NFJ6	384 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	CDH19	Q9H159	772 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	OR2AG1	Q9H205	316 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	CDT1	Q9H211	546 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	NDUFA13	Q9P0J0	144 aa		11.16	□□□□□ -0.62
MSI2-217	ENST00000583705	PADI3	Q9ULW8	664 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms