RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 COL5A1P20908 1838 aaPredicted RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 PRAMEF1O95521 474 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 SERPINE1P05121 402 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 PYGLP06737 847 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 C1SP09871 688 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 LTA4HP09960 611 aaKnown RBP11.79□□□□□ -0.52
GGA3-217ENST00000583667 ALDH3A1P30838 453 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 MMP12P39900 470 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 IL12RB1P42701 662 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 KIR2DL1P43626 348 aaPredicted RBP11.79□□□□□ -0.52
GGA3-217ENST00000583667 CDKN1CP49918 316 aaPredicted RBP11.79□□□□□ -0.52
GGA3-217ENST00000583667 DNAJB13P59910 316 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 CXADRP78310 365 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 IRF9Q00978 393 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 OCRLQ01968 901 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 SEMG2Q02383 582 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 PPARDQ03181 441 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ELP6Q0PNE2 266 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 DLG1Q12959 904 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 RALGDSQ12967 914 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ITGA9Q13797 1035 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ARHGEF7Q14155 803 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 LY6DQ14210 128 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 CHRNA6Q15825 494 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ZSCAN26Q16670 478 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 TMEM52BQ4KMG9 183 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 FAM46CQ5VWP2 391 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 UGT3A1Q6NUS8 523 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ERAP2Q6P179 960 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 C6orf89Q6UWU4 347 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 TMEM207Q6UWW9 146 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 SERPINA13PQ6UXR4 307 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ZYG11AQ6WRX3 759 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 MACC1Q6ZN28 852 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ZNF765Q7L2R6 523 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 SERPINA9Q86WD7 417 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 NXPE1Q8N323 547 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 FSTL5Q8N475 847 aaPredicted RBP11.79□□□□□ -0.52
GGA3-217ENST00000583667 RHEBL1Q8TAI7 183 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 HEXDCQ8WVB3 486 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 KCTD4Q8WVF5 259 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 SREK1Q8WXA9 508 aaKnown RBP11.79□□□□□ -0.52
GGA3-217ENST00000583667 CCDC126Q96EE4 140 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 PPP1R16AQ96I34 528 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 SEC16BQ96JE7 1060 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 NDNQ99608 321 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 RSPH9Q9H1X1 276 aaPredicted RBP11.79□□□□□ -0.52
GGA3-217ENST00000583667 CCDC68Q9H2F9 335 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 MRPL46Q9H2W6 279 aaKnown RBP11.79□□□□□ -0.52
GGA3-217ENST00000583667 MTG2Q9H4K7 406 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 TFB2MQ9H5Q4 396 aaKnown RBP11.79□□□□□ -0.52
GGA3-217ENST00000583667 FBRSQ9HAH7 460 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 GPAMQ9HCL2 828 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 FGFR1OP2Q9NVK5 253 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 THAP1Q9NVV9 213 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ZNF358Q9NW07 568 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 OXSMQ9NWU1 459 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 KCTD5Q9NXV2 234 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ZDHHC3Q9NYG2 299 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 SARDHQ9UL12 918 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 STON1Q9Y6Q2 735 aa11.79□□□□□ -0.52
GGA3-217ENST00000583667 ZNF106Q9H2Y7 1883 aaKnown RBP11.78□□□□□ -0.52
GGA3-217ENST00000583667 C1QTNF3-AMACRE9PGA6 284 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 EBAG9O00559 213 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 TRIM13O60858 407 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 VPS26AO75436 327 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 F7P08709 466 aaPredicted RBP11.78□□□□□ -0.52
GGA3-217ENST00000583667 PRSS56P0CW18 603 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 CCDC166P0CW27 439 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 FGF3P11487 239 aaPredicted RBP11.78□□□□□ -0.52
GGA3-217ENST00000583667 ZNF37AP17032 561 aaPredicted RBP11.78□□□□□ -0.52
GGA3-217ENST00000583667 SAT1P21673 171 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 BGNP21810 368 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 ACRV1P26436 265 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 SERPINB5P36952 375 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 NSG1P42857 185 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 ATP6V0D1P61421 351 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 MRPS21P82921 87 aaKnown RBP11.78□□□□□ -0.52
GGA3-217ENST00000583667 TLE3Q04726 772 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 BST1Q10588 318 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 ASPHQ12797 758 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 STX3Q13277 289 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 LRRC8EQ6NSJ5 796 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 CGB2Q6NT52 195 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 KLC3Q6P597 504 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 LIPIQ6XZB0 460 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 DBX2Q6ZNG2 339 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 PARS2Q7L3T8 475 aaKnown RBP11.78□□□□□ -0.52
GGA3-217ENST00000583667 OTOAQ7RTW8 1153 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 ISCA2Q86U28 154 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 CACNA2D3Q8IZS8 1091 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 PGBD3Q8N328 593 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 NKAPQ8N5F7 415 aaKnown RBP11.78□□□□□ -0.52
GGA3-217ENST00000583667 TRAM1L1Q8N609 369 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 CCDC197Q8NCU1 140 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 HMGB4Q8WW32 186 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 FAM131CQ96AQ9 280 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 NXNL1Q96CM4 212 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 VPS35Q96QK1 796 aa11.78□□□□□ -0.52
GGA3-217ENST00000583667 CDC6Q99741 560 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms