RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 JAMLQ86YT9 394 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 TRAPPC5Q8IUR0 188 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 SLITRK4Q8IW52 837 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 NAGSQ8N159 534 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 SPATA4Q8NEY3 305 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 HEXDCQ8WVB3 486 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 TRIM44Q96DX7 344 aaPredicted RBP24.43■■□□□ 1.5
TSEN54-209ENST00000583454 COPS8Q99627 209 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 STRADBQ9C0K7 418 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 KLC4Q9NSK0 619 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 TREX1Q9NSU2 369 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 SYBUQ9NX95 663 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 ZDHHC3Q9NYG2 299 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 LRIT1Q9P2V4 623 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 ASIC3Q9UHC3 531 aa24.43■■□□□ 1.5
TSEN54-209ENST00000583454 A6NCN8 305 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 DNALI1O14645 258 aaPredicted RBP24.42■■□□□ 1.5
TSEN54-209ENST00000583454 SGTAO43765 313 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 KCNJ13O60928 360 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 PRSS56P0CW18 603 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 ACRV1P26436 265 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 AKT1P31749 480 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 FOXN2P32314 431 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 MAGEA3P43357 314 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 DHX34Q14147 1143 aaKnown RBP24.42■■□□□ 1.5
TSEN54-209ENST00000583454 TAF1BQ53T94 588 aaPredicted RBP24.42■■□□□ 1.5
TSEN54-209ENST00000583454 KIAA1614Q5VZ46 1190 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 ZNF438Q7Z4V0 828 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 SGF29Q96ES7 293 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 SERPINB12Q96P63 405 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 TBC1D29Q9UFV1 150 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 LOXL2Q9Y4K0 774 aa24.42■■□□□ 1.5
TSEN54-209ENST00000583454 OR51F1A6NGY5 319 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 EML2O95834 649 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 ETV5P41161 510 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 MAZP56270 477 aaKnown RBP24.41■■□□□ 1.5
TSEN54-209ENST00000583454 INSCQ1MX18 579 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 AFTPHQ6ULP2 937 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 TAS2R42Q7RTR8 314 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 PCGF5Q86SE9 256 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 PATE1Q8WXA2 126 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 DCUN1D1Q96GG9 259 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 KRT12Q99456 494 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 SOX13Q9UN79 622 aa24.41■■□□□ 1.5
TSEN54-209ENST00000583454 SDK2Q58EX2 2172 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 MYO18BQ8IUG5 2567 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 OR2AG2A6NM03 316 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 GOLGA8MH3BSY2 632 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 TTI1O43156 1089 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 B4GAT1O43505 415 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 POP7O75817 140 aaKnown RBP24.4■■□□□ 1.5
TSEN54-209ENST00000583454 GOT2P00505 430 aaKnown RBP24.4■■□□□ 1.5
TSEN54-209ENST00000583454 TUBB4AP04350 444 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 RALBP11234 206 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 ITIH1P19827 911 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 NMBRP28336 390 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 LY6DQ14210 128 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 NR1D2Q14995 579 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 TGIF1Q15583 401 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 DBN1Q16643 649 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 BCL7AQ4VC05 210 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 FNBP1LQ5T0N5 605 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 CCDC81Q6ZN84 652 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 ZNF572Q7Z3I7 529 aaPredicted RBP24.4■■□□□ 1.5
TSEN54-209ENST00000583454 HOOK3Q86VS8 718 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 OR6P1Q8NGX9 317 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 OR4L1Q8NH43 312 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 CCNL2Q96S94 520 aaPredicted RBP24.4■■□□□ 1.5
TSEN54-209ENST00000583454 PISDQ9UG56 409 aa24.4■■□□□ 1.5
TSEN54-209ENST00000583454 MAGEB16A2A368 324 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 SDR42E2A6NKP2 422 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 CFAP99D6REC4 459 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 NVLO15381 856 aaKnown RBP24.39■■□□□ 1.49
TSEN54-209ENST00000583454 ZIC2O95409 532 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-209ENST00000583454 ATP1B2P14415 290 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-209ENST00000583454 PRAMEP78395 509 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 DMPKQ09013 629 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 SRSF6Q13247 344 aaKnown RBP24.39■■□□□ 1.49
TSEN54-209ENST00000583454 ITIH4Q14624 930 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 PLA2G4EQ3MJ16 856 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 IYDQ6PHW0 289 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 DET1Q7L5Y6 550 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 AMZ2Q86W34 360 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 MPP5Q8N3R9 675 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 SFRP1Q8N474 314 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 LINC00615Q96LM1 132 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-209ENST00000583454 SEMA6CQ9H3T2 930 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 CDC23Q9UJX2 597 aa24.39■■□□□ 1.49
TSEN54-209ENST00000583454 F3P13726 295 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 VCLP18206 1134 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 C16orf72Q14CZ0 275 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 LYPLAL1Q5VWZ2 237 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 IZUMO3Q5VZ72 239 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 WASH2PQ6VEQ5 465 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 ZNF605Q86T29 641 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 TRIM51Q9BSJ1 452 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 WASH6PQ9NQA3 447 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 PRDM8Q9NQV8 689 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 DNAJC16Q9Y2G8 782 aa24.38■■□□□ 1.49
TSEN54-209ENST00000583454 KLHL33A6NCF5 533 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms