RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 NOVA2Q9UNW9 492 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-228ENST00000583363 ZFHX4Q86UP3 3567 aa16.09■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SDK1Q7Z5N4 2213 aa16.09■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SPTY2D1-AS1A0A0U1RR47 76 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 E5RI56 91 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TLR4O00206 839 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 BCAT2O15382 392 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PHGDHO43175 533 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 MAGEC1O60732 1142 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 POP7O75817 140 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 FTH1P02794 183 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GSTM1P09488 218 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PYGBP11216 843 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 AOAHP28039 575 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CCR7P32248 378 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GSTM4Q03013 218 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SLC18A2Q05940 514 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ZNF460Q14592 562 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PYCR3Q53H96 274 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TTMPQ5BVD1 217 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KCTD16Q68DU8 428 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PAQR3Q6TCH7 311 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TMEM207Q6UWW9 146 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 C11orf96Q7Z7L8 435 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PIM3Q86V86 326 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 LRRTM4Q86VH4 590 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TRAPPC5Q8IUR0 188 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SPNS2Q8IVW8 549 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SIDT2Q8NBJ9 832 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 OR1E3Q8WZA6 343 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 FAM136AQ96C01 138 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CABS1Q96KC9 395 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ATP6V1G3Q96LB4 118 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SLC30A3Q99726 388 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TSSK1BQ9BXA7 367 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 FGF22Q9HCT0 170 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 MRPL40Q9NQ50 206 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ZNHIT2Q9UHR6 403 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PILRBQ9UKJ0 227 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SUFUQ9UMX1 484 aa16.08■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SPAG17Q6Q759 2223 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CNOT1A5YKK6 2376 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 A0A096LPK6 155 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 C17orf113A0A1B0GUU1 675 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PRSS38A1L453 326 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 MGAT4DA6NG13 374 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KPNA5O15131 536 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 VILLO15195 856 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KMOO15229 486 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SLC35E2BP0CK96 405 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SRP54P61011 504 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 EIF2B5Q13144 721 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PDAP1Q13442 181 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 FZD2Q14332 565 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ST3GAL2Q16842 350 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ZNF658BQ4V348 819 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CRTC3Q6UUV7 619 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 RAPH1Q70E73 1250 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CCDC91Q7Z6B0 441 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GIMAP7Q8NHV1 300 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CD200R1Q8TD46 325 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TSACCQ96A04 125 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SYTL2Q9HCH5 934 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GPAMQ9HCL2 828 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SARS2Q9NP81 518 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TMEM74BQ9NUR3 256 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SENP1Q9P0U3 644 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GULP1Q9UBP9 304 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SLC23A2Q9UGH3 650 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TRMT6Q9UJA5 497 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 MOSPD1Q9UJG1 213 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TLK1Q9UKI8 766 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PNMA8BQ9ULN7 279 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ACOT9Q9Y305 439 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PRKAB1Q9Y478 270 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ACTL7BQ9Y614 415 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 USP24Q9UPU5 2620 aa16.07■□□□□ 0.16
CDK5RAP3-228ENST00000583363 A0A087X1B8 175 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 A0A1B0GTW7 788 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GOLGA8RI6L899 631 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KCNJ13O60928 360 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TNFP01375 233 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GNSP15586 552 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CREB1P16220 341 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KRT4P19013 534 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CCNFP41002 786 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CSNK1EP49674 416 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 AFF3P51826 1226 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 MAGOHP61326 146 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ALG11Q2TAA5 492 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 NAPRTQ6XQN6 538 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 OTOAQ7RTW8 1153 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 AMZ2Q86W34 360 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SPATS2Q86XZ4 545 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GALNT13Q8IUC8 556 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SRRM1Q8IYB3 904 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ZBTB2Q8N680 514 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 OR2L2Q8NH16 312 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ELMO1Q92556 727 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms