RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	UNKL	Q9H9P5	680 aa	Known RBP	4.74	□□□□□ -1.65
MSI2-216	ENST00000582772	FANCE	Q9HB96	536 aa		4.74	□□□□□ -1.65
MSI2-216	ENST00000582772	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.74	□□□□□ -1.65
MSI2-216	ENST00000582772	FANCL	Q9NW38	375 aa		4.74	□□□□□ -1.65
MSI2-216	ENST00000582772	GPN3	Q9UHW5	284 aa	Predicted RBP	4.74	□□□□□ -1.65
MSI2-216	ENST00000582772	CDC23	Q9UJX2	597 aa		4.74	□□□□□ -1.65
MSI2-216	ENST00000582772	FREM3	P0C091	2139 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	PKHD1	P08F94	4074 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TRBV23OR9-2	A0A075B6M9	112 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	IGHV4-30-2	A0A087WSY4	118 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	HYKK	A2RU49	373 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	MBD3L3	A6NE82	208 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	HSPB2	A8KAH6	182 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	DVL2	O14641	736 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	EIF3D	O15371	548 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	FRS3	O43559	492 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	ACTN4	O43707	911 aa	Known RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	PRPF6	O94906	941 aa	Known RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	ZBTB11	O95625	1053 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	MBD3	O95983	291 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	LDHA	P00338	332 aa	Known RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	F13A1	P00488	732 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TNNC2	P02585	160 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	KRT1	P04264	644 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	SERPINA7	P05543	415 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	AMD1	P17707	334 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	XRCC1	P18887	633 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TFEB	P19484	476 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TACR2	P21452	398 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	RPS6KB1	P23443	525 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	GJB2	P29033	226 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	ADORA2B	P29275	332 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	FMO4	P31512	558 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	MMP12	P39900	470 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	SERPINH1	P50454	418 aa	Known RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TKTL1	P51854	596 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TBX4	P57082	545 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	HSPB2	Q16082	182 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	DUOXA2	Q1HG44	320 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	GOLGA7B	Q2TAP0	167 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	CR1L	Q2VPA4	569 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	PYCR3	Q53H96	274 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	LRRC73	Q5JTD7	316 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TMTC4	Q5T4D3	741 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	SAMD5	Q5TGI4	173 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	BSPRY	Q5W0U4	402 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	RHBDD2	Q6NTF9	364 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	IRGC	Q6NXR0	463 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	POMZP3	Q6PJE2	187 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TMEM151B	Q8IW70	566 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	FAM20C	Q8IXL6	584 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	SCML4	Q8N228	414 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	PELI3	Q8N2H9	469 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	LZTR1	Q8N653	840 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	POGLUT1	Q8NBL1	392 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	ZNF418	Q8TF45	676 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	POMGNT1	Q8WZA1	660 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	FKBP10	Q96AY3	582 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TRMT61A	Q96FX7	289 aa	Known RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TCEANC2	Q96MN5	208 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	FIZ1	Q96SL8	496 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	FAM213A	Q9BRX8	229 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	AP1M1	Q9BXS5	423 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	DUSP16	Q9BY84	665 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	PHACTR1	Q9C0D0	580 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TSPY26P	Q9H489	355 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	ST6GALNAC4	Q9H4F1	302 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	SMYD3	Q9H7B4	428 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	POPDC2	Q9HBU9	364 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	PDE11A	Q9HCR9	933 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	FAM49B	Q9NUQ9	324 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	DDX19A	Q9NUU7	478 aa	Known RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	JKAMP	Q9P055	326 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	ZNF629	Q9UEG4	869 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TBC1D29	Q9UFV1	150 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	PCDHA7	Q9UN72	937 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	SMC3	Q9UQE7	1217 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	VPS9D1	Q9Y2B5	631 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TLR6	Q9Y2C9	796 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	TESMIN	Q9Y4I5	508 aa		4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.73	□□□□□ -1.65
MSI2-216	ENST00000582772	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.72	□□□□□ -1.65
MSI2-216	ENST00000582772	DNAH10	Q8IVF4	4471 aa		4.72	□□□□□ -1.65
MSI2-216	ENST00000582772	KLF18	A0A0U1RQI7	1052 aa		4.72	□□□□□ -1.65
MSI2-216	ENST00000582772	TSPAN11	A1L157	253 aa		4.72	□□□□□ -1.65
MSI2-216	ENST00000582772	OR14I1	A6ND48	311 aa		4.72	□□□□□ -1.65
MSI2-216	ENST00000582772	GABRR3	A8MPY1	467 aa		4.72	□□□□□ -1.65
MSI2-216	ENST00000582772	EIF3CL	B5ME19	914 aa	Known RBP	4.72	□□□□□ -1.65
MSI2-216	ENST00000582772		F5H5T6	163 aa		4.72	□□□□□ -1.65
MSI2-216	ENST00000582772		K7ENM7	598 aa		4.72	□□□□□ -1.65
MSI2-216	ENST00000582772		M0QZ24	198 aa		4.72	□□□□□ -1.65
MSI2-216	ENST00000582772	QSOX1	O00391	747 aa		4.72	□□□□□ -1.65
MSI2-216	ENST00000582772	PPP1R12A	O14974	1030 aa	Predicted RBP	4.72	□□□□□ -1.65
MSI2-216	ENST00000582772	PRMT3	O60678	531 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms