RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CDKN2AIPNLQ96HQ2 116 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 CMKLR1Q99788 373 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 EPB41L1Q9H4G0 881 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 EIF2B3Q9NR50 452 aaKnown RBP24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 SCHIP1Q9P0W5 487 aaPredicted RBP24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 TTC7AQ9ULT0 858 aaPredicted RBP24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 HECTD1Q9ULT8 2610 aa24.39■■□□□ 1.49
CDC42EP4-205ENST00000580315 ARHGEF17Q96PE2 2063 aaPredicted RBP24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 DRG2P55039 364 aaKnown RBP24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 CACNG1Q06432 222 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 BCL7AQ4VC05 210 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 CCDC38Q502W7 563 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 TMPRSS9Q7Z410 1059 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 OR4D9Q8NGE8 314 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 CXorf40BQ96DE9 158 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 RANBP9Q96S59 729 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 SEMA6CQ9H3T2 930 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 UCK1Q9HA47 277 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 CASS4Q9NQ75 786 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 POT1Q9NUX5 634 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 ZDHHC3Q9NYG2 299 aa24.38■■□□□ 1.49
CDC42EP4-205ENST00000580315 LILRA5A6NI73 299 aa24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 AP3B1O00203 1094 aa24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 PGRMC1O00264 195 aaKnown RBP24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 LIPCP11150 499 aa24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 ITIH1P19827 911 aa24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 ADRA1DP25100 572 aa24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 PBLDP30039 288 aaPredicted RBP24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 GRIA1P42261 906 aa24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 NFATC3Q12968 1075 aa24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 TRA2AQ13595 282 aaKnown RBP eCLIP24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 NLRP9Q7RTR0 991 aa24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 PRICKLE2Q7Z3G6 844 aa24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 RBM12BQ8IXT5 1001 aaKnown RBP24.37■■□□□ 1.49
CDC42EP4-205ENST00000580315 SPTA1P02549 2419 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 TRBV5-4A0A0C4DH59 114 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 IGHV5-10-1A0A0J9YXX1 117 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 CCDC78A2IDD5 438 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 MGAT4DA6NG13 374 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 AGRPO00253 132 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 HGSO14964 777 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 WISP1O95388 367 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 ATP1B2P14415 290 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 BRAFP15056 766 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 PSMA3P25788 255 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 ACRV1P26436 265 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 SLC19A1P41440 591 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 MAPK9P45984 424 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 LIMK2P53671 638 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 TMEM71Q6P5X7 295 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 XKR5Q6UX68 686 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 ZNF574Q6ZN55 896 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 SERPINA9Q86WD7 417 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 BEND7Q8N7W2 519 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 PPHLN1Q8NEY8 458 aaKnown RBP24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 OR2L2Q8NH16 312 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.36■■□□□ 1.491e-11■■■■■ 34
CDC42EP4-205ENST00000580315 MAGOHBQ96A72 148 aaKnown RBP24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 MS4A14Q96JA4 679 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 CCDC74BQ96LY2 380 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 OSBPL9Q96SU4 736 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 ZNF624Q9P2J8 865 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 RIMKLBQ9ULI2 386 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 UNC13CQ8NB66 2214 aa24.36■■□□□ 1.49
CDC42EP4-205ENST00000580315 PRAMEF33A0A0G2JMD5 474 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 PRAMEF10O60809 474 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 ITGB2P05107 769 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 NFE2L1Q14494 772 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 WDR74Q6RFH5 385 aaPredicted RBP24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 TMEM26Q6ZUK4 368 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 NCSTNQ92542 709 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 EXTL1Q92935 676 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 LINC00615Q96LM1 132 aaPredicted RBP24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 AP1M1Q9BXS5 423 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 VPS37BQ9H9H4 285 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 ACSL5Q9ULC5 683 aa24.35■■□□□ 1.49
CDC42EP4-205ENST00000580315 IGLV3-16A0A075B6K0 115 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 GOLGA6L10A0A0M3HER8 536 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 OR52A4PA6NMU1 304 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 CSF2RBP32927 897 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 ETV5P41161 510 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 PRLHRP49683 370 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 CDKN1CP49918 316 aaPredicted RBP24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 CDK16Q00536 496 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 TSTD2Q5T7W7 516 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 METRNLQ641Q3 311 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 FAM83HQ6ZRV2 1179 aaPredicted RBP24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 ACTRT1Q8TDG2 376 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 PEX13Q92968 403 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 TTC1Q99614 292 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 TBC1D10AQ9BXI6 508 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 FAM117AQ9C073 453 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 FOXJ2Q9P0K8 574 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 SNX12Q9UMY4 172 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 PSMD13Q9UNM6 376 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 WDR37Q9Y2I8 494 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 TCAF1Q9Y4C2 921 aa24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 TLN1Q9Y490 2541 aaKnown RBP24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 ZNF106Q9H2Y7 1883 aaKnown RBP24.34■■□□□ 1.49
CDC42EP4-205ENST00000580315 CES2O00748 559 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms