RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 SAR1BQ9Y6B6 198 aa18.29■□□□□ 0.52
PPP4R1-215ENST00000580182 ZZEF1O43149 2961 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 CTAGE9A4FU28 777 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 TMX2-CTNND1H3BSU7 103 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 PLD2O14939 933 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 OR1I1O60431 355 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 ITIH1P19827 911 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 HALP42357 657 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 LIMK2P53671 638 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 PRAMEP78395 509 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 GPR18Q14330 331 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 DUS1LQ6P1R4 473 aaKnown RBP18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 FBXO39Q8N4B4 442 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 OR4D9Q8NGE8 314 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 GRK7Q8WTQ7 553 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 JPH3Q8WXH2 748 aaPredicted RBP18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 NCSTNQ92542 709 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 MFSD3Q96ES6 412 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 SLC46A1Q96NT5 459 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 INSM2Q96T92 566 aaPredicted RBP18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 TRIM56Q9BRZ2 755 aaKnown RBP18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 CCM2Q9BSQ5 444 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 ZMYND15Q9H091 742 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 KCND1Q9NSA2 647 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 POT1Q9NUX5 634 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 OGFRQ9NZT2 677 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 MARCH4Q9P2E8 410 aaPredicted RBP18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 LOXL2Q9Y4K0 774 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 PCDHGA8Q9Y5G5 932 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 APC2O95996 2303 aa18.28■□□□□ 0.52
PPP4R1-215ENST00000580182 LAMA5O15230 3695 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 LILRA5A6NI73 299 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 AP3B1O00203 1094 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 DUX1O43812 170 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 DXOO77932 396 aaKnown RBP18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 TNFSF15O95150 251 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 TYRP1P17643 537 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 NSG1P42857 185 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 PTGIRP43119 386 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 EPHA4P54764 986 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 ITIH4Q14624 930 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 PPP1R7Q15435 360 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 CLPPQ16740 277 aaPredicted RBP18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 ZNF658BQ4V348 819 aaPredicted RBP18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 FASTKD1Q53R41 847 aaKnown RBP18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 TMEM71Q6P5X7 295 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 KLHL7Q8IXQ5 586 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 LSMEM2Q8N112 164 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 AVL9Q8NBF6 648 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 FGF11Q92914 225 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 PEX13Q92968 403 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 DCBLD2Q96PD2 775 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 KIFC1Q9BW19 673 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 UCK1Q9HA47 277 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 IMP3Q9NV31 184 aaKnown RBP18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 PISDQ9UG56 409 aa18.27■□□□□ 0.52
PPP4R1-215ENST00000580182 KMT2BQ9UMN6 2715 aaPredicted RBP18.27■□□□□ 0.51
PPP4R1-215ENST00000580182 C17orf113A0A1B0GUU1 675 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 A8MU76 341 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 KRT37O76014 449 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 THRAP10827 490 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 RBMS1P29558 406 aaKnown RBP18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 ETV5P41161 510 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 SARNPP82979 210 aaKnown RBP18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 EIF3IQ13347 325 aaKnown RBP18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 SNAP47Q5SQN1 464 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 PACS1Q6VY07 963 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 NAPRTQ6XQN6 538 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 NAT8LQ8N9F0 302 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 HM13Q8TCT9 377 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 RMDN2Q96LZ7 410 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 C12orf66Q96MD2 445 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 ZNF578Q96N58 590 aaPredicted RBP18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 SERPINB12Q96P63 405 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 COG4Q9H9E3 785 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 CATSPERZQ9NTU4 200 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 KLHL3Q9UH77 587 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 PCYOX1Q9UHG3 505 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 ACSL5Q9ULC5 683 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 SOX13Q9UN79 622 aa18.26■□□□□ 0.51
PPP4R1-215ENST00000580182 ZFHX4Q86UP3 3567 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 CDRT15L2A8MXV6 281 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 CD3EAPO15446 510 aaKnown RBP18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 UBXN7O94888 489 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 AP2A2O94973 939 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 JMJD7P0C870 316 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 MTHFD1P11586 935 aaKnown RBP18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 CCL4P13236 92 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 ARNTP27540 789 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 PDHA2P29803 388 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 EIF2S3P41091 472 aaKnown RBP18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 PREPP48147 710 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 GFERP55789 205 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 PTK6Q13882 451 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 LYPLAL1Q5VWZ2 237 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 CAPRIN2Q6IMN6 1127 aaKnown RBP18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 WDR74Q6RFH5 385 aaPredicted RBP18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 IGF2-ASQ6U949 168 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 AGGF1Q8N302 714 aaeCLIP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms