RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 CCDC183Q5T5S1 534 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 HENMT1Q5T8I9 393 aaKnown RBP8.66□□□□□ -1.02
SNX11-205ENST00000578861 FAM69BQ5VUD6 431 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 NCBP2-AS2Q69YL0 99 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 TIGD7Q6NT04 549 aaPredicted RBP8.66□□□□□ -1.02
SNX11-205ENST00000578861 XKRXQ6PP77 449 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 MEX3BQ6ZN04 569 aaKnown RBP8.66□□□□□ -1.02
SNX11-205ENST00000578861 MED25Q71SY5 747 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 TMEM200AQ86VY9 491 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 PLXDC1Q8IUK5 500 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 LRRC49Q8IUZ0 686 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 PHYKPLQ8IUZ5 450 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 TRIM48Q8IWZ4 208 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 NIPA2Q8N8Q9 360 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 KCTD6Q8NC69 237 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 DNAJB8Q8NHS0 232 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 ARRDC2Q8TBH0 407 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 CCHCR1Q8TD31 782 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 TM9SF4Q92544 642 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 MAML1Q92585 1016 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 NAP1L5Q96NT1 182 aaPredicted RBP8.66□□□□□ -1.02
SNX11-205ENST00000578861 PLEKHG4BQ96PX9 1271 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 FOXC2Q99958 501 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 MLPHQ9BV36 600 aaPredicted RBP8.66□□□□□ -1.02
SNX11-205ENST00000578861 SPATA16Q9BXB7 569 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.66□□□□□ -1.02
SNX11-205ENST00000578861 NAT10Q9H0A0 1025 aaKnown RBP8.66□□□□□ -1.02
SNX11-205ENST00000578861 RMI1Q9H9A7 625 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 HAUS2Q9NVX0 235 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 SIDT1Q9NXL6 827 aaKnown RBP8.66□□□□□ -1.02
SNX11-205ENST00000578861 DTLQ9NZJ0 730 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 PKD2L2Q9NZM6 624 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 OGFRQ9NZT2 677 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 SCHIP1Q9P0W5 487 aaPredicted RBP8.66□□□□□ -1.02
SNX11-205ENST00000578861 SLC23A2Q9UGH3 650 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 DNPEPQ9ULA0 475 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 DNAJC16Q9Y2G8 782 aa8.66□□□□□ -1.02
SNX11-205ENST00000578861 ABCA4P78363 2273 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 SPTBP11277 2137 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 RNF212BA8MTL3 300 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 ANKRD66B4E2M5 251 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 MYO1FO00160 1098 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 KIF1CO43896 1103 aaKnown RBP8.65□□□□□ -1.02
SNX11-205ENST00000578861 NUAK1O60285 661 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 SLC25A14O95258 325 aaPredicted RBP8.65□□□□□ -1.02
SNX11-205ENST00000578861 VIPP01282 170 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 JCHAINP01591 159 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 CYP1A2P05177 515 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 MMP2P08253 660 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 AMD1P17707 334 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 LPOP22079 712 aaPredicted RBP8.65□□□□□ -1.02
SNX11-205ENST00000578861 CES1P23141 567 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 CCNCP24863 283 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 PBX1P40424 430 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 RPL26P61254 145 aaKnown RBP8.65□□□□□ -1.02
SNX11-205ENST00000578861 UBE2IP63279 158 aaKnown RBP8.65□□□□□ -1.02
SNX11-205ENST00000578861 CSNK1G2P78368 415 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 GBE1Q04446 702 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 SLC10A2Q12908 348 aaPredicted RBP8.65□□□□□ -1.02
SNX11-205ENST00000578861 CDC16Q13042 620 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 PAFAH1B3Q15102 231 aaKnown RBP8.65□□□□□ -1.02
SNX11-205ENST00000578861 INSCQ1MX18 579 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 ZNF569Q5MCW4 686 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 ZFYVE27Q5T4F4 411 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 ALG1LQ6GMV1 187 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 MTFR2Q6P444 385 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 CLEC17AQ6ZS10 378 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 PPP1R3BQ86XI6 285 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.02
SNX11-205ENST00000578861 CPLX3Q8WVH0 158 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 MR1Q95460 341 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 C9orf72Q96LT7 481 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 TSGA13Q96PP4 275 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 GBP4Q96PP9 640 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 BRD8Q9H0E9 1235 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 CARD9Q9H257 536 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 EPB41L1Q9H4G0 881 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 TRIM10Q9UDY6 481 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 SNX7Q9UNH6 387 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 RPL26L1Q9UNX3 145 aaKnown RBP8.65□□□□□ -1.02
SNX11-205ENST00000578861 SHOC2Q9UQ13 582 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 SLC30A1Q9Y6M5 507 aa8.65□□□□□ -1.02
SNX11-205ENST00000578861 A0A087X0T9 212 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 LILRA5A6NI73 299 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 OR5K4A6NMS3 321 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 SMTNL1A8MU46 457 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 PDZK1P1A8MUH7 402 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 KCNK1O00180 336 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 MTX2O75431 263 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 MTA2O94776 668 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 UBXN7O94888 489 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 SERPINC1P01008 464 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 FAM228BP0C875 321 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 PTMSP20962 102 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 RPL10P27635 214 aaKnown RBP8.64□□□□□ -1.03
SNX11-205ENST00000578861 SLC19A1P41440 591 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 ARSEP51690 589 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 VAV2P52735 878 aa8.64□□□□□ -1.03
SNX11-205ENST00000578861 ATP1A4Q13733 1029 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms