RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ITGB6P18564 788 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 LHCGRP22888 699 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 MAP4P27816 1152 aaKnown RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 AOAHP28039 575 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 GRIA2P42262 883 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 AP1S2P56377 157 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 TBL3Q12788 808 aaKnown RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 GTF2H2Q13888 395 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 FASTKQ14296 549 aaKnown RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 TRIM68Q6AZZ1 485 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 GTF2H2CQ6P1K8 395 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 PRMT9Q6P2P2 845 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 SERPINA13PQ6UXR4 307 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 LARP4Q71RC2 724 aaKnown RBP eCLIP10.95□□□□□ -0.661e-6■□□□□ 10.2
SKA2-204ENST00000578519 MTSS1LQ765P7 747 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 MILR1Q7Z6M3 343 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 PHYKPLQ8IUZ5 450 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 DEFB107AQ8IZN7 70 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 FAM9CQ8IZT9 166 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 PGAM4Q8N0Y7 254 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 PELI3Q8N2H9 469 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 MIER2Q8N344 545 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 PHTF2Q8N3S3 785 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 FBXW8Q8N3Y1 598 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 POU5F2Q8N7G0 328 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 ENDOVQ8N8Q3 282 aaKnown RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 TERB1Q8NA31 727 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 DDHD1Q8NEL9 900 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 GIMAP7Q8NHV1 300 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 PIP4K2CQ8TBX8 421 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 UBTD2Q8WUN7 234 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 ELSPBP1Q96BH3 223 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 AP2M1Q96CW1 435 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 SLC30A3Q99726 388 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 BOCQ9BWV1 1114 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 PBX4Q9BYU1 374 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 CD244Q9BZW8 370 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 DENND2DQ9H6A0 471 aaPredicted RBP10.95□□□□□ -0.66
SKA2-204ENST00000578519 ZNF385DQ9H6B1 395 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 CERS4Q9HA82 394 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 PARVBQ9HBI1 364 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 GID8Q9NWU2 228 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 POLG2Q9UHN1 485 aa10.95□□□□□ -0.66
SKA2-204ENST00000578519 TMEM233B4DJY2 109 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 IFRD1O00458 451 aaPredicted RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 UBFD1O14562 309 aaKnown RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 PIP5K1BO14986 540 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 RGS14O43566 566 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 LZTS3O60299 673 aaPredicted RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 STK16O75716 305 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 EBLN1P0CF75 366 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 HGFP14210 728 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 EPB42P16452 691 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 CPOXP36551 454 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 MMP12P39900 470 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 RPIAP49247 311 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 MRPL19P49406 292 aaKnown RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 NUDT2P50583 147 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 SLC25A3Q00325 362 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 FCHO2Q0JRZ9 810 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 SFSWAPQ12872 951 aaKnown RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 MAP7D1Q3KQU3 841 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 ITPRIPL2Q3MIP1 535 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 UGT3A2Q3SY77 523 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 TMEM52BQ4KMG9 183 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 SYTL3Q4VX76 610 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 AGKQ53H12 422 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 ACSBG2Q5FVE4 666 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 HENMT1Q5T8I9 393 aaKnown RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 CLEC6AQ6EIG7 209 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 FAM109BQ6ICB4 259 aaPredicted RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 SDE2Q6IQ49 451 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 OGFOD2Q6N063 350 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 LIPIQ6XZB0 460 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 HACD2Q6Y1H2 254 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 CYHR1Q6ZMK1 362 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 BNC2Q6ZN30 1099 aaPredicted RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 RNF165Q6ZSG1 346 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 UBE2R2Q712K3 238 aaPredicted RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 LRRC70Q7Z2Q7 622 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 TECPR1Q7Z6L1 1165 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 GALNT13Q8IUC8 556 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 CLDN19Q8N6F1 224 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 METTL6Q8TCB7 284 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 CXorf40AQ8TE69 158 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 GDPD5Q8WTR4 605 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 SKA2Q8WVK7 121 aaPredicted RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 SORCS1Q8WY21 1168 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 ELMO1Q92556 727 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 GLYATL1Q969I3 302 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 TMEM159Q96B96 161 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 ROPN1LQ96C74 230 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 MOCOSQ96EN8 888 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 PPP3R2Q96LZ3 170 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 RIOK2Q9BVS4 552 aaKnown RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 APOL5Q9BWW9 433 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 SLC12A9Q9BXP2 914 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 SLC29A3Q9BZD2 475 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 ABCG8Q9H221 673 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 VCX3BQ9H321 246 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms