RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 TRIM74Q86UV6 250 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 LRRTM4Q86VH4 590 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 WDR5BQ86VZ2 330 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 TRAPPC5Q8IUR0 188 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 CPNE9Q8IYJ1 553 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 MYO1HQ8N1T3 1032 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 FSTL5Q8N475 847 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-202ENST00000578430 CCDC63Q8NA47 563 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 TMEM145Q8NBT3 493 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 ARMC2Q8NEN0 867 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 PRSS33Q8NF86 280 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 LKAAEAR1Q8TD35 194 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 MGARPQ8TDB4 240 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 SREK1Q8WXA9 508 aaKnown RBP13.2□□□□□ -0.3
SRSF1-202ENST00000578430 RLN3Q8WXF3 142 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 KIAA1191Q96A73 305 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 BIRC7Q96CA5 298 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 CCDC126Q96EE4 140 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 LINGO1Q96FE5 620 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 SLC30A3Q99726 388 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 CAPS2Q9BXY5 557 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 CCDC134Q9H6E4 229 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 GALPQ9UBC7 116 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 ADAM21Q9UKJ8 722 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 TMCO1Q9UM00 188 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 SLC17A4Q9Y2C5 497 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 OR1A2Q9Y585 309 aa13.2□□□□□ -0.3
SRSF1-202ENST00000578430 PIKFYVEQ9Y2I7 2098 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 MGAT4DA6NG13 374 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 SYCE1LA8MT33 242 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 TNFRSF10CO14798 259 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 DNAJC6O75061 913 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 GPC4O75487 556 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 SLCO2B1O94956 709 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 TOP3BO95985 862 aaKnown RBP13.19□□□□□ -0.3
SRSF1-202ENST00000578430 CPA3P15088 417 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 ITGB6P18564 788 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 TFEBP19484 476 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 TAC1P20366 129 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 CD27P26842 260 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 PXNP49023 591 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-202ENST00000578430 PGGT1BP53609 377 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 ASPHQ12797 758 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 RPA4Q13156 261 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 C16orf46Q6P387 395 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 GCNT7Q6ZNI0 430 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 ADAMTSL2Q86TH1 951 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 ISCA2Q86U28 154 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 DCP2Q8IU60 420 aaKnown RBP13.19□□□□□ -0.3
SRSF1-202ENST00000578430 OXR1Q8N573 874 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 OR2L2Q8NH16 312 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 RAB3IL1Q8TBN0 382 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 STAG3L4Q8TBR4 150 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 HM13Q8TCT9 377 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 EEF1AKMT1Q8WVE0 214 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 CKAP2Q8WWK9 683 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 ELMO1Q92556 727 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 GLMNQ92990 594 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 FAM136AQ96C01 138 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 SCARF2Q96GP6 870 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-202ENST00000578430 BMFQ96LC9 184 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 PAIP2Q9BPZ3 127 aaKnown RBP13.19□□□□□ -0.3
SRSF1-202ENST00000578430 LGR4Q9BXB1 951 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 FZD3Q9NPG1 666 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 ZNF358Q9NW07 568 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 COPG2Q9UBF2 871 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 TMEM98Q9Y2Y6 226 aa13.19□□□□□ -0.3
SRSF1-202ENST00000578430 SLC5A10A0PJK1 596 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 POM121BA6NF01 834 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 SRRM3A6NNA2 597 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-202ENST00000578430 TARM1B6A8C7 271 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 GRID2O43424 1007 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 KERAO60938 352 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 H2AFYO75367 372 aaKnown RBP13.18□□□□□ -0.3
SRSF1-202ENST00000578430 POP7O75817 140 aaKnown RBP13.18□□□□□ -0.3
SRSF1-202ENST00000578430 CEACAM5P06731 702 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 BPGMP07738 259 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 MYL2P10916 166 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 TDGF1P13385 188 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 VCLP18206 1134 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 THOP1P52888 689 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 NUBP1P53384 320 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 GYS2P54840 703 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 ARHGAP8P85298 464 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 RPL6Q02878 288 aaKnown RBP13.18□□□□□ -0.3
SRSF1-202ENST00000578430 OVGP1Q12889 678 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 PTK2BQ14289 1009 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 PDK4Q16654 411 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 ZNF658BQ4V348 819 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-202ENST00000578430 SYTL3Q4VX76 610 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 ACSBG2Q5FVE4 666 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 ZYG11AQ6WRX3 759 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 RGS9BPQ6ZS82 235 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 TAX1BP1Q86VP1 789 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 IQCHQ86VS3 1027 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 AMZ2Q86W34 360 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 LONP2Q86WA8 852 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 NUDCD3Q8IVD9 361 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 C1orf210Q8IVY1 113 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 TMEM151AQ8N4L1 468 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms