RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 RFTN2Q52LD8 501 aaPredicted RBP17.3■□□□□ 0.36
ERBB2-205ENST00000578199 NANOGP8Q6NSW7 305 aa17.3■□□□□ 0.36
ERBB2-205ENST00000578199 MBOAT1Q6ZNC8 495 aa17.3■□□□□ 0.36
ERBB2-205ENST00000578199 CHERPQ8IWX8 916 aaKnown RBP17.3■□□□□ 0.36
ERBB2-205ENST00000578199 TMEM199Q8N511 208 aa17.3■□□□□ 0.36
ERBB2-205ENST00000578199 NANOGQ9H9S0 305 aa17.3■□□□□ 0.36
ERBB2-205ENST00000578199 ARMC1Q9NVT9 282 aa17.3■□□□□ 0.36
ERBB2-205ENST00000578199 NUDT4Q9NZJ9 180 aa17.3■□□□□ 0.36
ERBB2-205ENST00000578199 CFAP97Q9P2B7 532 aa17.3■□□□□ 0.36
ERBB2-205ENST00000578199 URODP06132 367 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 DGKQP52824 942 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 LRRC73Q5JTD7 316 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 RFLNAQ6ZTI6 216 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 ERMP1Q7Z2K6 904 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 RALGPS2Q86X27 583 aaPredicted RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 ADGRG2Q8IZP9 1017 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 AHI1Q8N157 1196 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 C2orf49Q9BVC5 232 aaPredicted RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 CFHR5Q9BXR6 569 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 TRIM4Q9C037 500 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 MRPL17Q9NRX2 175 aaKnown RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 FARSBQ9NSD9 589 aaKnown RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 ACTR3BQ9P1U1 418 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 HSFX1Q9UBD0 423 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 INTS6Q9UL03 887 aaKnown RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 PIKFYVEQ9Y2I7 2098 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 DOCK6Q96HP0 2047 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 MYOFQ9NZM1 2061 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 HTRA2O43464 458 aaPredicted RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 FKTNO75072 461 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 EEDO75530 441 aaKnown RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 GNRH1P01148 92 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 AP1S1P61966 158 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 NR6A1Q15406 480 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 CDKN3Q16667 212 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 CYP51A1Q16850 503 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 RETSATQ6NUM9 610 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 RBM44Q6ZP01 1051 aaKnown RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 CMTR2Q8IYT2 770 aaKnown RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 CBR4Q8N4T8 237 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.29■□□□□ 0.368e-7■■■■□ 19.9
ERBB2-205ENST00000578199 EGFL8Q99944 293 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 ACTL8Q9H568 366 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 RIC8BQ9NVN3 520 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 DUS2Q9NX74 493 aaKnown RBP17.29■□□□□ 0.36
ERBB2-205ENST00000578199 PCDHB1Q9Y5F3 818 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 C5orf42Q9H799 3197 aa17.29■□□□□ 0.36
ERBB2-205ENST00000578199 PPP3CCP48454 512 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 PLOD1Q02809 727 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 PCBP2Q15366 365 aaKnown RBP eCLIP17.28■□□□□ 0.362e-15■■■□□ 15.6
ERBB2-205ENST00000578199 SLC39A5Q6ZMH5 540 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 SNX20Q7Z614 316 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 EPHX4Q8IUS5 362 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 TCEAL8Q8IYN2 117 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 ADGRG5Q8IZF4 528 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 PDLIM5Q96HC4 596 aaKnown RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 KCTD14Q9BQ13 255 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 RNF208Q9H0X6 261 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 ZNF696Q9H7X3 374 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 SUN2Q9UH99 717 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 ST14Q9Y5Y6 855 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 GLYATL1P3A0A0U1RQE8 302 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 NPIPB15A6NHN6 443 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 PSMA4P25789 261 aaKnown RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 RPL5P46777 297 aaKnown RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 SLC5A9Q2M3M2 681 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 AP5B1Q2VPB7 878 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 PDCD4Q53EL6 469 aaKnown RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 SGO1Q5FBB7 561 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 LCN8Q6JVE9 175 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 CERS6Q6ZMG9 384 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 FAM43BQ6ZT52 329 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 EFL1Q7Z2Z2 1120 aaKnown RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 MILR1Q7Z6M3 343 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 ADAMTSL2Q86TH1 951 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 RBFAQ8N0V3 343 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 GPR26Q8NDV2 337 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 PPM1MQ96MI6 270 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 TRIM54Q9BYV2 358 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 CRLS1Q9UJA2 301 aa17.28■□□□□ 0.36
ERBB2-205ENST00000578199 LEF1Q9UJU2 399 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 POLR3HQ9Y535 204 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-205ENST00000578199 AQP12BA6NM10 295 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 LSM1O15116 133 aaKnown RBP17.27■□□□□ 0.36
ERBB2-205ENST00000578199 S100BP04271 92 aaPredicted RBP17.27■□□□□ 0.36
ERBB2-205ENST00000578199 GNAO1P09471 354 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 BMP2P12643 396 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 ACRV1P26436 265 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 HTRA3P83110 453 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 BNIP2Q12982 314 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 TRAF3Q13114 568 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 SELPLGQ14242 412 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 INPP5AQ14642 412 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 AQP12AQ8IXF9 295 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 ANKFN1Q8N957 763 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 SH3GL3Q99963 347 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 CAAP1Q9H8G2 361 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 GNPTGQ9UJJ9 305 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 A0A1W2PRU2 124 aa17.27■□□□□ 0.36
ERBB2-205ENST00000578199 CCDC160A6NGH7 325 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms