RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 NUP210LQ5VU65 1888 aa3.92□□□□□ -1.78
PTPRM-206ENST00000578093 ESYT3A0FGR9 886 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 BICDL2A1A5D9 508 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 GTPBP10A4D1E9 387 aaKnown RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 C7orf72A4D263 438 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ZSCAN5CA6NGD5 496 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 NPIPB15A6NHN6 443 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 B4E171 279 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 F8VZ95 297 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TRAFD1O14545 582 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CREB3O43889 395 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 PSPNO60542 156 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 PRAMEF11O60813 436 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 SORBS2O94875 1100 aaKnown RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 GNA14O95837 355 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CYP1A1P04798 512 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 HOXC4P09017 264 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TCN2P20062 427 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 KELP23276 732 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 SERPINA4P29622 427 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 SDC4P31431 198 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CSTF2P33240 577 aaKnown RBP eCLIP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 RFC1P35251 1148 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 DCTP40126 519 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ADCY8P40145 1251 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TSPAN7P41732 249 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ACTR1BP42025 376 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 STAT1P42224 750 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 PTPN9P43378 593 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 KLK7P49862 253 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 SUOXP51687 545 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 GFERP55789 205 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 GPR85P60893 370 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ACTR1AP61163 376 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 RPS18P62269 152 aaKnown RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CDK3Q00526 305 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 MC2RQ01718 297 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 FMO1Q01740 532 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 OGDHQ02218 1023 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 RAD51Q06609 339 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ABHD18Q0P651 414 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ILF3Q12906 894 aaKnown RBP eCLIP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TRAF2Q12933 501 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 LSAMPQ13449 338 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 NFATC2Q13469 925 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 SQSTM1Q13501 440 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TRA2AQ13595 282 aaKnown RBP eCLIP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 RAPGEF1Q13905 1077 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ACOX1Q15067 660 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 PCM1Q15154 2024 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CA9Q16790 459 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 PARP15Q460N3 678 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 NADK2Q4G0N4 442 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 INO80DQ53TQ3 878 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CFAP58Q5T655 872 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 DCAF12Q5T6F0 453 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 FOXB2Q5VYV0 432 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 DENND2CQ68D51 928 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 RAET1GQ6H3X3 334 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ERAP2Q6P179 960 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TMEM71Q6P5X7 295 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 BRAT1Q6PJG6 821 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 MARK2Q7KZI7 788 aaKnown RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ARCQ7LC44 396 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 STRADAQ7RTN6 431 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ARHGAP22Q7Z5H3 698 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 HSD11B1LQ7Z5J1 315 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 SRLQ86TD4 932 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 JAZF1Q86VZ6 243 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CREBRFQ8IUR6 639 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CCDC13Q8IYE1 715 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 LZTR1Q8N653 840 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 Q8NA96 180 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 ATL2Q8NHH9 583 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 SLC30A5Q8TAD4 765 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 SSC4DQ8WTU2 575 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 APOBEC4Q8WW27 367 aaKnown RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CASKIN2Q8WXE0 1202 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 CENPIQ92674 756 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 KISS1RQ969F8 398 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 DTD2Q96FN9 168 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 C1orf159Q96HA4 380 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TIGD1Q96MW7 591 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 PEBP4Q96S96 227 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 PCDHB18PQ96TA0 734 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 AGAP2Q99490 1192 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TBC1D10AQ9BXI6 508 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 NAA15Q9BXJ9 866 aaKnown RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TEX101Q9BY14 249 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 GSDMCQ9BYG8 508 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 SLC39A8Q9C0K1 460 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 GANQ9H2C0 597 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 PDCL3Q9H2J4 239 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 FANCLQ9NW38 375 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 TRNAU1APQ9NX07 287 aaKnown RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 OGFRQ9NZT2 677 aa3.91□□□□□ -1.78
PTPRM-206ENST00000578093 AKAP7Q9P0M2 348 aaPredicted RBP3.91□□□□□ -1.78
PTPRM-206ENST00000578093 LUZP4Q9P127 313 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms