RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TLCD2A6NGC4 264 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 SLC9B1P1A6NJY1 282 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 LRRC53A6NM62 1247 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 KCNK1O00180 336 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 HNRNPRO43390 633 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 ZBTB11O95625 1053 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 ATXN8OSP0DMR3 200 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 SKILP12757 684 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 VCLP18206 1134 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 CDK11BP21127 795 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 OTX2P32243 289 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 SSR1P43307 286 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 ARSEP51690 589 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 KPNA2P52292 529 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 CTSCP53634 463 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 RRADP55042 308 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 DCDC1P59894 354 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 GBE1Q04446 702 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 DPYSL3Q14195 570 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 PIGHQ14442 188 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 NFE2L1Q14494 772 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 TMTC4Q5T4D3 741 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 E4F1Q66K89 784 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 PDPK2PQ6A1A2 396 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 DUS1LQ6P1R4 473 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 TMEM220Q6QAJ8 160 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 SPOCD1Q6ZMY3 1216 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 APTXQ7Z2E3 356 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 CUZD1Q86UP6 607 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 AMZ2Q86W34 360 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 CPNE8Q86YQ8 564 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 RASGEF1AQ8N9B8 481 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 CCNYQ8ND76 341 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 OR1L3Q8NH93 324 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 FAM71BQ8TC56 605 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 CPT1BQ92523 772 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 MOCOSQ96EN8 888 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 TRIB3Q96RU7 358 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 BARD1Q99728 777 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 CEP41Q9BYV8 373 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 ILKAPQ9H0C8 392 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 ZNF552Q9H707 407 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 MAGEE1Q9HCI5 957 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 IMP3Q9NV31 184 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 SOHLH2Q9NX45 425 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 ZNF711Q9Y462 761 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 SPO11Q9Y5K1 396 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 CCDC88CQ9P219 2028 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 LDB2O43679 373 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 UGT1A9O60656 530 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 UGT1A6P19224 532 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 POLR2CP19387 275 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 UGT1A1P22309 533 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 UGT1A4P22310 534 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 ZBTB17Q13105 803 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 XRCC4Q13426 336 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 GTF2H3Q13889 308 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 NAA30Q147X3 362 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 LLGL1Q15334 1064 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 ZRSR2Q15696 482 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 ASIC2Q16515 512 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 PCSK7Q16549 785 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 ANO6Q4KMQ2 910 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 ZNF789Q5FWF6 425 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 VWA5B1Q5TIE3 1220 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 LYPLAL1Q5VWZ2 237 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 FAM198BQ6UWH4 519 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 KCNMB4Q86W47 210 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 OOSP2Q86WS3 158 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 TMEM151BQ8IW70 566 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 MCEMP1Q8IX19 187 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 SYTL1Q8IYJ3 562 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 PQLC3Q8N755 202 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 BEND7Q8N7W2 519 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 ANKRD20A12PQ8NF67 263 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 OR8K5Q8NH50 307 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 NAT14Q8WUY8 206 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 FATE1Q969F0 183 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 TTC25Q96NG3 672 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 CD180Q99467 661 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 ISCUQ9H1K1 167 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 ACTR5Q9H9F9 607 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 UGT1A7Q9HAW7 530 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 UGT1A10Q9HAW8 530 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 UGT1A8Q9HAW9 530 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 RAD18Q9NS91 495 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 HAUS2Q9NVX0 235 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 NFKBIL1Q9UBC1 381 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 ENTPD4Q9Y227 616 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 OSGIN2Q9Y236 505 aa9.85□□□□□ -0.83
NPLOC4-220ENST00000576940 PDZD2O15018 2839 aa9.84□□□□□ -0.83
NPLOC4-220ENST00000576940 OR2AG2A6NM03 316 aa9.84□□□□□ -0.83
NPLOC4-220ENST00000576940 TMEM150CB9EJG8 249 aa9.84□□□□□ -0.83
NPLOC4-220ENST00000576940 GPR39O43194 453 aa9.84□□□□□ -0.83
NPLOC4-220ENST00000576940 ZG16O60844 167 aa9.84□□□□□ -0.83
NPLOC4-220ENST00000576940 KCNJ13O60928 360 aa9.84□□□□□ -0.83
NPLOC4-220ENST00000576940 KLF7O75840 302 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-220ENST00000576940 MYBL1P10243 752 aa9.84□□□□□ -0.83
NPLOC4-220ENST00000576940 MTHFD1P11586 935 aaKnown RBP9.84□□□□□ -0.83
NPLOC4-220ENST00000576940 CDH3P22223 829 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms