RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SMYD1Q8NB12 490 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 VANGL1Q8TAA9 524 aaPredicted RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 MYDGFQ969H8 173 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 PRICKLE1Q96MT3 831 aaPredicted RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 TEPSINQ96N21 525 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 GIN1Q9NXP7 522 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 MARCH4Q9P2E8 410 aaPredicted RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 ERGIC3Q9Y282 383 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 ASB3Q9Y575 518 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 MEIS3P2A8K0S8 358 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 H3BNH8 94 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 SLC28A1O00337 649 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 OPN1SWP03999 348 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 GALNT2Q10471 571 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 FBXL22Q6P050 247 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 PTCHD4Q6ZW05 846 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 KDM1BQ8NB78 822 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 KBTBD8Q8NFY9 601 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 EEF1AKMT1Q8WVE0 214 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 OLFM1Q99784 485 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 FCF1Q9Y324 198 aaKnown RBP17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 H7C4K7 107 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 K7EPI3 171 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 SERPINA4P29622 427 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 WDR36Q8NI36 951 aaKnown RBP17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 C2orf49Q9BVC5 232 aaPredicted RBP17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 KIFC1Q9BW19 673 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 ZFYVE1Q9HBF4 777 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 CTPS2Q9NRF8 586 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 CD84Q9UIB8 345 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 IRS2Q9Y4H2 1338 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 ZCWPW2A0A1B0GU75 182 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 BTBD19C9JJ37 291 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 SNX4O95219 450 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 TACR2P21452 398 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 WARSP23381 471 aaKnown RBP17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 ARSDP51689 593 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 ERVK-8P63133 956 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 PTGR1Q14914 329 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 PYDC2Q56P42 97 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 CYP4Z1Q86W10 505 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 TOP1MTQ969P6 601 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 MAGEE1Q9HCI5 957 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 CD320Q9NPF0 282 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 GKN1Q9NS71 199 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 STMN3Q9NZ72 180 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 ZNF624Q9P2J8 865 aaPredicted RBP17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 GPC6Q9Y625 555 aaPredicted RBP17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 CHD4Q14839 1912 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 SRCAPQ6ZRS2 3230 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 CDK14O94921 469 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 IGSF6O95976 241 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 TRBC1P01850 177 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 TNNI3P19429 210 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 ACOX1Q15067 660 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 ZNF829Q3KNS6 432 aaPredicted RBP17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 TIMM50Q3ZCQ8 353 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 DEF8Q6ZN54 512 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 LUZP2Q86TE4 346 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 FIBCD1Q8N539 461 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 MTMR14Q8NCE2 650 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 C7orf57Q8NEG2 295 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 NELL1Q92832 810 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 C1GALT1C1Q96EU7 318 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 STARD7Q9NQZ5 370 aa17.65■□□□□ 0.42
ATPAF1-214ENST00000576409 UPK3BL1B0FP48 263 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 UPK3BL2E5RIL1 263 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 SLC22A2O15244 555 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 PRSS56P0CW18 603 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 TALDO1P37837 337 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 SPANXN4Q5MJ08 99 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 SMYD5Q6GMV2 418 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 NANOGP8Q6NSW7 305 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 RBFAQ8N0V3 343 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 COL26A1Q96A83 441 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 C12orf42Q96LP6 360 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 AARSD1Q9BTE6 412 aaKnown RBP17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 NANOGQ9H9S0 305 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 A0A1W2PP18 115 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 OR2AG2A6NM03 316 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 ZNF99A8MXY4 864 aaPredicted RBP17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 FPGTO14772 594 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 WBP4O75554 376 aaKnown RBP17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 PTPN5P54829 565 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 CDH12P55289 794 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 CCDC80Q76M96 950 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 COPS4Q9BT78 406 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 SPRTNQ9H040 489 aaPredicted RBP17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 GIT1Q9Y2X7 761 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 TPST2O60704 377 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 CATP04040 527 aaKnown RBP17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 ANKS3Q6ZW76 656 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 CILP2Q8IUL8 1156 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 STON2Q8WXE9 905 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 ART5Q96L15 291 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 TMEM209Q96SK2 561 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 TMLHEQ9NVH6 421 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 DNAJB9Q9UBS3 223 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 MAP4K5Q9Y4K4 846 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 ZFP37Q9Y6Q3 630 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms