RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 CFAP20Q9Y6A4 193 aaKnown RBP14.96□□□□□ -0.01
SMG6-220ENST00000576218 ASPMQ8IZT6 3477 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 FREM2Q5SZK8 3169 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 USP27XA6NNY8 438 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 AGAP14A8MT82 685 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 QSOX1O00391 747 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 IFRD1O00458 451 aaPredicted RBP14.95□□□□□ -0.02
SMG6-220ENST00000576218 PHF2O75151 1096 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 RASSF9O75901 435 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 GOT2P00505 430 aaKnown RBP14.95□□□□□ -0.02
SMG6-220ENST00000576218 FTH1P02794 183 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 PRSS56P0CW18 603 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 THRAP10827 490 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 HOXB3P14651 431 aaPredicted RBP14.95□□□□□ -0.02
SMG6-220ENST00000576218 BRAFP15056 766 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 TYRP1P17643 537 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 ITIH1P19827 911 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 TPSB2P20231 275 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 NSG1P42857 185 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 NPY2RP49146 381 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 ARSDP51689 593 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 CRADDP78560 199 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 CDK16Q00536 496 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 GPR18Q14330 331 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 CLCA4Q14CN2 919 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 C16orf72Q14CZ0 275 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 TPSAB1Q15661 275 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 DBN1Q16643 649 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 KCTD19Q17RG1 926 aaPredicted RBP14.95□□□□□ -0.02
SMG6-220ENST00000576218 SYTL3Q4VX76 610 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 AARS2Q5JTZ9 985 aaKnown RBP14.95□□□□□ -0.02
SMG6-220ENST00000576218 TTC27Q6P3X3 843 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 WDR74Q6RFH5 385 aaPredicted RBP14.95□□□□□ -0.02
SMG6-220ENST00000576218 FAM83HQ6ZRV2 1179 aaPredicted RBP14.95□□□□□ -0.02
SMG6-220ENST00000576218 OR13J1Q8NGT2 312 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 OR4L1Q8NH43 312 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 CAPZA3Q96KX2 299 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 NAPGQ99747 312 aaPredicted RBP14.95□□□□□ -0.02
SMG6-220ENST00000576218 CCM2Q9BSQ5 444 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 TSSK1BQ9BXA7 367 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 UCK1Q9HA47 277 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 ASCL3Q9NQ33 180 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 TMEM9Q9P0T7 183 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 SAMD15Q9P1V8 674 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 SLC2A6Q9UGQ3 507 aa14.95□□□□□ -0.02
SMG6-220ENST00000576218 URB1O60287 2271 aaKnown RBP14.94□□□□□ -0.02
SMG6-220ENST00000576218 TRBV5-4A0A0C4DH59 114 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 A0A1W2PNU3 283 aaPredicted RBP14.94□□□□□ -0.02
SMG6-220ENST00000576218 CES2O00748 559 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 ZNF185O15231 689 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 KLK10O43240 276 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 AP2A2O94973 939 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 OR56A5P0C7T3 313 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 MTHFD1P11586 935 aaKnown RBP14.94□□□□□ -0.02
SMG6-220ENST00000576218 MGAT1P26572 445 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 SLC5A2P31639 672 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 FNTAP49354 379 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 ITIH4Q14624 930 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 RPE65Q16518 533 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 METRNLQ641Q3 311 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 IRGCQ6NXR0 463 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 KLHL35Q6PF15 583 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 IGF2-ASQ6U949 168 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 CERS6Q6ZMG9 384 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 ZNF574Q6ZN55 896 aaPredicted RBP14.94□□□□□ -0.02
SMG6-220ENST00000576218 PIANPQ8IYJ0 282 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 PRR11Q96HE9 360 aaPredicted RBP14.94□□□□□ -0.02
SMG6-220ENST00000576218 TGM7Q96PF1 710 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 SLC40A1Q9NP59 571 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 CHRAC1Q9NRG0 131 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 CATSPERZQ9NTU4 200 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 RIMKLBQ9ULI2 386 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 PYCARDQ9ULZ3 195 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 LHX6Q9UPM6 363 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 HEBP2Q9Y5Z4 205 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 COLEC10Q9Y6Z7 277 aa14.94□□□□□ -0.02
SMG6-220ENST00000576218 COL27A1Q8IZC6 1860 aaPredicted RBP14.93□□□□□ -0.02
SMG6-220ENST00000576218 A0A087WV48 116 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 CTAGE9A4FU28 777 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 EFCAB7A8K855 629 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 PAMP19021 973 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 FOXN2P32314 431 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 SQSTM1Q13501 440 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 BOP1Q14137 746 aaKnown RBP14.93□□□□□ -0.02
SMG6-220ENST00000576218 COL28A1Q2UY09 1125 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 ARMC6Q6NXE6 501 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 LRRC8BQ6P9F7 803 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 MICALCLQ6ZW33 695 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 CLDN19Q8N6F1 224 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 JPH3Q8WXH2 748 aaPredicted RBP14.93□□□□□ -0.02
SMG6-220ENST00000576218 ELMO1Q92556 727 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 PEX13Q92968 403 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 USP7Q93009 1102 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 LINC00615Q96LM1 132 aaPredicted RBP14.93□□□□□ -0.02
SMG6-220ENST00000576218 ZNF778Q96MU6 729 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 COG4Q9H9E3 785 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 SYBUQ9NX95 663 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 ASIC3Q9UHC3 531 aa14.93□□□□□ -0.02
SMG6-220ENST00000576218 KIF26BQ2KJY2 2108 aa14.92□□□□□ -0.02
SMG6-220ENST00000576218 KMT2BQ9UMN6 2715 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms