RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PIANPQ8IYJ0 282 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 AVL9Q8NBF6 648 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 OR10G6Q8NH81 332 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 HEXDCQ8WVB3 486 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 HDAC10Q969S8 669 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 SH3KBP1Q96B97 665 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 CXorf40BQ96DE9 158 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 SEMA6CQ9H3T2 930 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 DKK4Q9UBT3 224 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 WDR37Q9Y2I8 494 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 DNMT3AQ9Y6K1 912 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-216ENST00000575599 KIF26BQ2KJY2 2108 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13□□□□□ -0.33
RPAIN-216ENST00000575599 TRBV5-4A0A0C4DH59 114 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 SRRM3A6NNA2 597 aaPredicted RBP13□□□□□ -0.33
RPAIN-216ENST00000575599 TMX2-CTNND1H3BSU7 103 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 SGTAO43765 313 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 DUX1O43812 170 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 KCNJ13O60928 360 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 MCM3P25205 808 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 MPSTP25325 297 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 MGAT1P26572 445 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 CCKBRP32239 447 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 FOXN2P32314 431 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 CSF2RBP32927 897 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 SLC19A1P41440 591 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 PTGIRP43119 386 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 LSSP48449 732 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 PRLHRP49683 370 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 GPLD1P80108 840 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 SLC7A5Q01650 507 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 KCNJ11Q14654 390 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 CLCA4Q14CN2 919 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 DBN1Q16643 649 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 ERCC6LQ2NKX8 1250 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 PCID2Q5JVF3 399 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 AGAP9Q5VTM2 703 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 ANKRD22Q5VYY1 191 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 AFTPHQ6ULP2 937 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 ABRAXAS1Q6UWZ7 409 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 ZNF534Q76KX8 674 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 NLRP9Q7RTR0 991 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 SLITRK4Q8IW52 837 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 IFT20Q8IY31 132 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 OR6P1Q8NGX9 317 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 WDR36Q8NI36 951 aaKnown RBP13□□□□□ -0.33
RPAIN-216ENST00000575599 SLCO2A1Q92959 643 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 TBRG4Q969Z0 631 aaKnown RBP eCLIP13□□□□□ -0.334e-10■■■■■ 86.3
RPAIN-216ENST00000575599 LIN37Q96GY3 246 aaPredicted RBP13□□□□□ -0.33
RPAIN-216ENST00000575599 TBC1D10AQ9BXI6 508 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 LDHAL6BQ9BYZ2 381 aaPredicted RBP13□□□□□ -0.33
RPAIN-216ENST00000575599 TRIM31Q9BZY9 425 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 IL22Q9GZX6 179 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 CHRAC1Q9NRG0 131 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 SYBUQ9NX95 663 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 BFARQ9NZS9 450 aa13□□□□□ -0.33
RPAIN-216ENST00000575599 ZNF624Q9P2J8 865 aaPredicted RBP13□□□□□ -0.33
RPAIN-216ENST00000575599 IGLV3-16A0A075B6K0 115 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 PRAMEF33A0A0G2JMD5 474 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 MGAT4DA6NG13 374 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 AP3B1O00203 1094 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 NDC80O14777 642 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 TMEM63AO94886 807 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 HGFP14210 728 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 XRCC1P18887 633 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-216ENST00000575599 PSMA3P25788 255 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 RBMS1P29558 406 aaKnown RBP12.99□□□□□ -0.33
RPAIN-216ENST00000575599 SARNPP82979 210 aaKnown RBP12.99□□□□□ -0.33
RPAIN-216ENST00000575599 CDK16Q00536 496 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 GUCY2DQ02846 1103 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 ZFP36L1Q07352 338 aaKnown RBP12.99□□□□□ -0.33
RPAIN-216ENST00000575599 PTK6Q13882 451 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 TBC1D25Q3MII6 688 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 LRRC8BQ6P9F7 803 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 WASH2PQ6VEQ5 465 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 RAB11FIP2Q7L804 512 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 CFAP206Q8IYR0 622 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 LSMEM2Q8N112 164 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 FBXO39Q8N4B4 442 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 CLDN19Q8N6F1 224 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 RCBTB1Q8NDN9 531 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 OR2L2Q8NH16 312 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 CPT1BQ92523 772 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 CCDC74BQ96LY2 380 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 ERP44Q9BS26 406 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 TRIM51Q9BSJ1 452 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 WWP1Q9H0M0 922 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 WASH6PQ9NQA3 447 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 POT1Q9NUX5 634 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 IMP3Q9NV31 184 aaKnown RBP12.99□□□□□ -0.33
RPAIN-216ENST00000575599 WDR70Q9NW82 654 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 TMEM9Q9P0T7 183 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 RIMKLBQ9ULI2 386 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 LOXL2Q9Y4K0 774 aa12.99□□□□□ -0.33
RPAIN-216ENST00000575599 CFAP20Q9Y6A4 193 aaKnown RBP12.99□□□□□ -0.33
RPAIN-216ENST00000575599 CELSR3Q9NYQ7 3312 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 IGHV5-10-1A0A0J9YXX1 117 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 LILRA5A6NI73 299 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 GOLGA8MH3BSY2 632 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms