RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 HSD17B3P37058 310 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 PLOD1Q02809 727 aaPredicted RBP16.78■□□□□ 0.28
NUP88-210ENST00000574867 TMED2Q15363 201 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 TCEA2Q15560 299 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 FAM45BPQ6NSW5 357 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 SLC30A9Q6PML9 568 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 SLC25A45Q8N413 288 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 UHMK1Q8TAS1 419 aaKnown RBP16.78■□□□□ 0.28
NUP88-210ENST00000574867 FAM45AQ8TCE6 357 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 ELMO1Q92556 727 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 VPS39Q96JC1 886 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 CCDC77Q9BR77 488 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 DUSP23Q9BVJ7 150 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 CAAP1Q9H8G2 361 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 SPATS2LQ9NUQ6 558 aaKnown RBP16.78■□□□□ 0.28
NUP88-210ENST00000574867 NLGN3Q9NZ94 848 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 TAAR2Q9P1P5 351 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 DNAJC16Q9Y2G8 782 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 IKBKGQ9Y6K9 419 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 EP300Q09472 2414 aaPredicted RBP16.78■□□□□ 0.28
NUP88-210ENST00000574867 NIPSNAP2O75323 286 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 VPS26AO75436 327 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 CD9P21926 228 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 IDSP22304 550 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 ABCG1P45844 678 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 LIMK2P53671 638 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 RPA4Q13156 261 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 NFE2L1Q14494 772 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 UAP1Q16222 522 aaPredicted RBP16.77■□□□□ 0.28
NUP88-210ENST00000574867 ZNF658BQ4V348 819 aaPredicted RBP16.77■□□□□ 0.28
NUP88-210ENST00000574867 SYTL3Q4VX76 610 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 GATAD2AQ86YP4 633 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 CNPY4Q8N129 248 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 GPATCH11Q8N954 259 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 LKAAEAR1Q8TD35 194 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 SLC44A1Q8WWI5 657 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 PAFAH2Q99487 392 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 COG4Q9H9E3 785 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 GULP1Q9UBP9 304 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 ACSL5Q9ULC5 683 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 FRYLO94915 3013 aa16.77■□□□□ 0.28
NUP88-210ENST00000574867 ZFHX2Q9C0A1 2572 aaPredicted RBP16.77■□□□□ 0.28
NUP88-210ENST00000574867 IQCF5A8MTL0 148 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 YY2O15391 372 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 FLRT2O43155 660 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 INHBAP08476 426 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 SLC2A4P14672 509 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 CHRM3P20309 590 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 BOP1Q14137 746 aaKnown RBP16.77■□□□□ 0.27
NUP88-210ENST00000574867 UGT3A1Q6NUS8 523 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 TAOK1Q7L7X3 1001 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 OTOAQ7RTW8 1153 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 KRT222Q8N1A0 295 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 ASZ1Q8WWH4 475 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 ATXN7L3BQ96GX2 97 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 NDNQ99608 321 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 PPCSQ9HAB8 311 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 LATS2Q9NRM7 1088 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 TAS2R13Q9NYV9 303 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 KLHL42Q9P2K6 505 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 PCOLCE2Q9UKZ9 415 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 CABIN1Q9Y6J0 2220 aa16.77■□□□□ 0.27
NUP88-210ENST00000574867 FAM95CA0A1B0GW59 222 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 APOA4P06727 396 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 ITGB6P18564 788 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 AOAHP28039 575 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 CCR7P32248 378 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 GRK6P43250 576 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 LIMK1P53667 647 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 RBM20Q5T481 1227 aaKnown RBP16.76■□□□□ 0.27
NUP88-210ENST00000574867 METRNLQ641Q3 311 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 WASH2PQ6VEQ5 465 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 DBX2Q6ZNG2 339 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 CFAP206Q8IYR0 622 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 OR4C6Q8NH72 309 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 TMEM159Q96B96 161 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 WASH6PQ9NQA3 447 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 FAM8A1Q9UBU6 413 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 LAMA1P25391 3075 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 FFAR2O15552 330 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 NUDT17P0C025 328 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 SKIV2L2P42285 1042 aaKnown RBP16.76■□□□□ 0.27
NUP88-210ENST00000574867 MSH2P43246 934 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 SERPINB9P50453 376 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 DEFB133Q30KQ1 61 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 TTLL9Q3SXZ7 439 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 PLEKHS1Q5SXH7 462 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 C6orf132Q5T0Z8 1188 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 HECTD2Q5U5R9 776 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 AGAP9Q5VTM2 703 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 FAM83HQ6ZRV2 1179 aaPredicted RBP16.76■□□□□ 0.27
NUP88-210ENST00000574867 FAM46DQ8NEK8 389 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 HNRNPLLQ8WVV9 542 aaKnown RBP16.76■□□□□ 0.27
NUP88-210ENST00000574867 GLMNQ92990 594 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 ELMO2Q96JJ3 720 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 GPR22Q99680 433 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 DPEP2Q9H4A9 486 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 ZNF180Q9UJW8 692 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 MED16Q9Y2X0 877 aa16.76■□□□□ 0.27
NUP88-210ENST00000574867 SLC5A10A0PJK1 596 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms