RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ZDHHC12Q96GR4 267 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 ELMO2Q96JJ3 720 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 C12orf66Q96MD2 445 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 OR6C1Q96RD1 312 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 TRIT1Q9H3H1 467 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 SMOXQ9NWM0 555 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 PILRAQ9UKJ1 303 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 KCTD3Q9Y597 815 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 PRR19A6NJB7 356 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 B8ZZF3 427 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 TOX3O15405 576 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 SLC28A2O43868 658 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 KIF1CO43896 1103 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 PRKAR1AP10644 381 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 MTHFD1P11586 935 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 MAP4P27816 1152 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 CA5AP35218 305 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 ADRA1AP35348 466 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 ARL4DP49703 201 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 SH3BP2P78314 561 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 DMPKQ09013 629 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 KRT33BQ14525 404 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 RPE65Q16518 533 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 TBR1Q16650 682 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 LINC00303Q3SY05 128 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 ZRANB3Q5FWF4 1079 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 SEL1L2Q5TEA6 688 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 ARMC6Q6NXE6 501 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 DUS1LQ6P1R4 473 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 RANBP10Q6VN20 620 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 PRSS42Q7Z5A4 293 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 UNC5BQ8IZJ1 945 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 TAB3Q8N5C8 712 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 FAM71DQ8N9W8 422 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 SIDT2Q8NBJ9 832 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 ULK4Q96C45 1275 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 STAMBPL1Q96FJ0 436 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 ALS2CR12Q96Q35 445 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 EFHD1Q9BUP0 239 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 WWP1Q9H0M0 922 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 ZNF768Q9H5H4 540 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 FAM96AQ9H5X1 160 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 LRRC40Q9H9A6 602 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 SIDT1Q9NXL6 827 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 LNPEPQ9UIQ6 1025 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 TENM4Q6N022 2769 aa9.45□□□□□ -0.9
NPLOC4-212ENST00000573328 LOC101059948A0A1B0GTJ6 334 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 UBA6A0AVT1 1052 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 KLHL33A6NCF5 533 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 MGAT4DA6NG13 374 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 J3QKU1 62 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 CCL22O00626 93 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 KIAA0754O94854 1291 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 POLBP06746 335 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 SFTPCP11686 197 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 CDC25BP30305 580 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 MC4RP32245 332 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 ZNF140P52738 457 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 PPP1CAP62136 330 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 ABHD18Q0P651 414 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 TUBB3Q13509 450 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 POU6F1Q14863 301 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 P3H1Q32P28 736 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 METRNLQ641Q3 311 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 BORAQ6PGQ7 559 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 XKR5Q6UX68 686 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 TAS2R42Q7RTR8 314 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 SNX20Q7Z614 316 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 OOSP2Q86WS3 158 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 GAS2L3Q86XJ1 694 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 TMEM139Q8IV31 216 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 CFAP206Q8IYR0 622 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 NXPE1Q8N323 547 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 ESX1Q8N693 406 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 EXD3Q8N9H8 876 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 OR2L2Q8NH16 312 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 STARD8Q92502 1023 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 DNAJC1Q96KC8 554 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 COPS8Q99627 209 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 TMEM121Q9BTD3 319 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 SLC12A9Q9BXP2 914 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 VPS37BQ9H9H4 285 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 PIH1D1Q9NWS0 290 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 IMPACTQ9P2X3 320 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 FEZ2Q9UHY8 353 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 ACSL5Q9ULC5 683 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 TMEM184BQ9Y519 407 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 CAPN6Q9Y6Q1 641 aa9.44□□□□□ -0.9
NPLOC4-212ENST00000573328 A0A0U1RQJ8 604 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 CCDC78A2IDD5 438 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 DDX3YO15523 660 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 DLGAP3O95886 979 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 ATP1B2P14415 290 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 TPH1P17752 444 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 TCN2P20062 427 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms