RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CST9LP1Q5W188 147 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SLFN12LQ6IEE8 588 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 GDF6Q6KF10 455 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 NEPROQ6NW34 567 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 AADACL2Q6P093 401 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MPZL3Q6UWV2 235 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CXCL17Q6UXB2 119 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 ZPBP2Q6X784 338 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 ZNF365Q70YC5 407 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 LINC00346Q8IVM7 164 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 FAM71AQ8IYT1 594 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PLD5Q8N7P1 536 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 POC5Q8NA72 575 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 NOA1Q8NC60 698 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 ICA1LQ8NDH6 482 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 RBM15BQ8NDT2 890 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 FBXL13Q8NEE6 735 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 OR52J3Q8NH60 311 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 DUSP19Q8WTR2 217 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 GLMPQ8WWB7 406 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 OR1E3Q8WZA6 343 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 GATA6Q92908 595 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 NT5C3BQ969T7 300 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MS4A14Q96JA4 679 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MAGED4Q96JG8 741 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SAMD8Q96LT4 415 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 NSMCE2Q96MF7 247 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PTCHD1Q96NR3 888 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SSX3Q99909 188 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PKP2Q99959 881 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SEMA3CQ99985 751 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 RTKNQ9BST9 563 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 FUZQ9BT04 418 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CINPQ9BW66 212 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 PRR14Q9BWN1 585 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TLR10Q9BXR5 811 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PARD6BQ9BYG5 372 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MAGEB5Q9BZ81 275 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 KLC2Q9H0B6 622 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SLC25A18Q9H1K4 315 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 ADAMTS10Q9H324 1103 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 NXF3Q9H4D5 531 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 PLEKHA4Q9H4M7 779 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SMYD3Q9H7B4 428 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 RMND5AQ9H871 391 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TRPC7Q9HCX4 862 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PALMDQ9NP74 551 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PRDM8Q9NQV8 689 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 PRMT8Q9NR22 394 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 TBC1D23Q9NUY8 699 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 KANSL3Q9P2N6 904 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 TRPC4Q9UBN4 977 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 AFF4Q9UHB7 1163 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 SLC7A8Q9UHI5 535 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SIX4Q9UIU6 781 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 CDH7Q9ULB5 785 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 VANGL2Q9ULK5 521 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 HSF4Q9ULV5 492 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MYO6Q9UM54 1294 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SLC22A14Q9Y267 594 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 SLC9A8Q9Y2E8 581 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MRPS7Q9Y2R9 242 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 TDRKHQ9Y2W6 561 aaKnown RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 HES2Q9Y543 173 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 NME7Q9Y5B8 376 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 NFS1Q9Y697 457 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 MAD1L1Q9Y6D9 718 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 KIF26AQ9ULI4 1882 aaPredicted RBP3.53□□□□□ -1.84
SMG6-208ENST00000570874 PCNTO95613 3336 aa3.53□□□□□ -1.84
SMG6-208ENST00000570874 GRIN2DO15399 1336 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ATXN2Q99700 1313 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 A0A0A0MRY4 1105 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 A0A1W2PN81 502 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 MBLAC1A4D2B0 266 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 TMEM247A6NEH6 219 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 NPIPB15A6NHN6 443 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 DBX1A6NMT0 343 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 MYO1GB0I1T2 1018 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 J3QL48 77 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PSMD11O00231 422 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 MAGEB2O15479 319 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 HTRA2O43464 458 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 HCRTR2O43614 444 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 BUB1BO60566 1050 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 TOMM70O94826 608 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PCDH8O95206 1070 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 SIX3O95343 332 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 ONECUT2O95948 504 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 HMGN1P05114 100 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 KRT19P08727 400 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 IGFBP1P08833 259 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 SPARCP09486 303 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 H2AFZP0C0S5 128 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 TMEM191BP0C7N4 346 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 STAG3L1P0CL83 205 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 UNGP13051 313 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 AKR1A1P14550 325 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 CTRB1P17538 263 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PFKLP17858 780 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ERCC2P18074 760 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms