RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PRLHRP49683 370 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ABHD18Q0P651 414 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 OLIG2Q13516 323 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 LY6DQ14210 128 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 NFE2L1Q14494 772 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 IL11RAQ14626 422 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CYB5D1Q6P9G0 228 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 KLHL35Q6PF15 583 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SNX20Q7Z614 316 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 NXPE1Q8N323 547 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 IL22RA1Q8N6P7 574 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 RSC1A1Q92681 617 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SLC45A3Q96JT2 553 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 FAM118BQ9BPY3 351 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 EFHD1Q9BUP0 239 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 FRMD8P1Q9BZ68 369 aaPredicted RBP16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 LRRC40Q9H9A6 602 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 KCTD3Q9Y597 815 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ERI2A8K979 691 aaKnown RBP16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 PSMD3O43242 534 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 RALBP11234 206 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 MTHFD1P11586 935 aaKnown RBP16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 LIFP15018 202 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 AKT1P31749 480 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 FNBP1LQ5T0N5 605 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ARHGEF18Q6ZSZ5 1173 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CARFQ8N187 725 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 EXD3Q8N9H8 876 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 OR13C4Q8NGS5 318 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 GPR150Q8NGU9 434 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 UBXN4Q92575 508 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CD180Q99467 661 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 APOL2Q9BQE5 337 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 APMAPQ9HDC9 416 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TRIM10Q9UDY6 481 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 PACSIN2Q9UNF0 486 aaPredicted RBP16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CAPN6Q9Y6Q1 641 aa16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TLN1Q9Y490 2541 aaKnown RBP16.72■□□□□ 0.27
MAP1LC3B-208ENST00000570189 B8ZZF3 427 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 STK17BO94768 372 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 AP2A1O95782 977 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 FTCDO95954 541 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 GSTM1P09488 218 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 FGF5P12034 268 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 PLA2G2AP14555 144 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TYRP1P17643 537 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 NELFEP18615 380 aaKnown RBP16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ITGALP20701 1170 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 STIP1P31948 543 aaKnown RBP16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 LEPRP48357 1165 aaKnown RBP16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 GSTM4Q03013 218 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ZNF658BQ4V348 819 aaPredicted RBP16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TIPARPQ7Z3E1 657 aaKnown RBP16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ZNF605Q86T29 641 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 KMT5CQ86Y97 462 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ESX1Q8N693 406 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 FAM71DQ8N9W8 422 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 HM13Q8TCT9 377 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SLC41A2Q96JW4 573 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TGM7Q96PF1 710 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 FCRL4Q96PJ5 515 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CCM2Q9BSQ5 444 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 DESI2Q9BSY9 194 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TSGA10Q9BZW7 698 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 NLE1Q9NVX2 485 aaPredicted RBP16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 KLHL3Q9UH77 587 aa16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 R3HDM2Q9Y2K5 976 aaKnown RBP16.71■□□□□ 0.27
MAP1LC3B-208ENST00000570189 A0A0U1RQJ8 604 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ZNF891A8MT65 544 aaPredicted RBP16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CFAP99D6REC4 459 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 METTL18O95568 372 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ATP1B2P14415 290 aaPredicted RBP16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 GDF10P55107 478 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 OASLQ15646 514 aaKnown RBP16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 TBR1Q16650 682 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■□□□□ 9.4
MAP1LC3B-208ENST00000570189 CAPRIN2Q6IMN6 1127 aaKnown RBP16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 LINC00523Q86TU6 105 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 BPHLQ86WA6 291 aaPredicted RBP16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 EXTL1Q92935 676 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CATSPER2Q96P56 530 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 COPS8Q99627 209 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CTRCQ99895 268 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ADNPQ9H2P0 1102 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 KIR3DX1Q9H7L2 352 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 STARD5Q9NSY2 213 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CRLS1Q9UJA2 301 aa16.7■□□□□ 0.26
MAP1LC3B-208ENST00000570189 OR5K3A6NET4 321 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 MROH6A6NGR9 719 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 GOLGA6L6A8MZA4 724 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PTMAP06454 111 aaKnown RBP16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ITGB6P18564 788 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ACRV1P26436 265 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 NDUFS1P28331 727 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 STAT5AP42229 794 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 GSDMDP57764 484 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CACHD1Q5VU97 1274 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ZNF662Q6ZS27 426 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 STYXQ8WUJ0 223 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 JPH3Q8WXH2 748 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms