RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 E7EQ34 232 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 FANCGO15287 622 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 PRICKLE3O43900 615 aaPredicted RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 DIAPH2O60879 1101 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 GFPT2O94808 682 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 SNRPB2P08579 225 aaKnown RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 MYBL2P10244 700 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 PSMA2P25787 234 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 SOX5P35711 763 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 PREPP48147 710 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 DRG2P55039 364 aaKnown RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 DCDC1P59894 354 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 RPL7AP62424 266 aaKnown RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 RBPJQ06330 500 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 PTPRRQ15256 657 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 INAQ16352 499 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 CLEC16AQ2KHT3 1053 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 MLIPQ5VWP3 458 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 LCN10Q6JVE6 187 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 TIGD7Q6NT04 549 aaPredicted RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 DPY19L2P1Q6NXN4 242 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 TMEM207Q6UWW9 146 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 B4GALNT4Q76KP1 1039 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 GPR135Q8IZ08 494 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 TTC30BQ8N4P2 665 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 TEX26Q8N6G2 289 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 SLC20A1Q8WUM9 679 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 CPLX3Q8WVH0 158 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 N4BP2L2Q92802 583 aaPredicted RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 WDR24Q96S15 920 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 SRPK1Q96SB4 655 aaKnown RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 KCTD15Q96SI1 283 aaPredicted RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 ZCCHC2Q9C0B9 1178 aaKnown RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 ZFYVE1Q9HBF4 777 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 PCDH9Q9HC56 1237 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 PARVAQ9NVD7 372 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 GPATCH2LQ9NWQ4 482 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 NDOR1Q9UHB4 597 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 CHKBQ9Y259 395 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 ZDHHC9Q9Y397 364 aa8.45□□□□□ -1.06
SMG1-216ENST00000569122 DNMT3AQ9Y6K1 912 aaPredicted RBP8.45□□□□□ -1.06
SMG1-216ENST00000569122 ANKRD36A6QL64 1941 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 TRGV8A0A0C4DH27 118 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 A0A0U1RQS6 177 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 FAM221AA4D161 298 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 KLHL33A6NCF5 533 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 ANKRD66B4E2M5 251 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 TMEM150CB9EJG8 249 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 AGPSO00116 658 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 CCL21O00585 134 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 PCDH17O14917 1159 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 KLF7O75840 302 aaPredicted RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 NADKO95544 446 aaPredicted RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 CCDC172P0C7W6 258 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 CD99P14209 185 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 CHRNB2P17787 502 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 CDH3P22223 829 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 NDUFS1P28331 727 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 PPP1CAP62136 330 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 DPYSQ14117 519 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 RPE65Q16518 533 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 SMTNL2Q2TAL5 461 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 PLA2G4EQ3MJ16 856 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 BOLA3Q53S33 107 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 ALG1LQ6GMV1 187 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 GFRALQ6UXV0 394 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 SPOCD1Q6ZMY3 1216 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 MON1BQ7L1V2 547 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 AMZ2Q86W34 360 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 TRAPPC5Q8IUR0 188 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 MLKLQ8NB16 471 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 LPCAT1Q8NF37 534 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 OR2Y1Q8NGV0 311 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 PROKR1Q8TCW9 393 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 CCDC120Q96HB5 630 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 CNDP1Q96KN2 507 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 LMF1Q96S06 567 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 SPOCK3Q9BQ16 436 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 SNRNP25Q9BV90 132 aaKnown RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 NUP85Q9BW27 656 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 AP1M1Q9BXS5 423 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 TDRD1Q9BXT4 1180 aaKnown RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 MCCC2Q9HCC0 563 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 SEPT11Q9NVA2 429 aaKnown RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 CWC15Q9P013 229 aaKnown RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 IFT80Q9P2H3 777 aaPredicted RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 NFKBIL1Q9UBC1 381 aaPredicted RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 TRIM10Q9UDY6 481 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 PCSK1NQ9UHG2 260 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 PTRH2Q9Y3E5 179 aaKnown RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 COLEC10Q9Y6Z7 277 aa8.44□□□□□ -1.06
SMG1-216ENST00000569122 DIDO1Q9BTC0 2240 aaKnown RBP8.44□□□□□ -1.06
SMG1-216ENST00000569122 TNRC6AQ8NDV7 1962 aaKnown RBP8.43□□□□□ -1.06
SMG1-216ENST00000569122 TCRBV5S1A1TA0A578 114 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 OR6C74A6NCV1 312 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 ZNF749O43361 778 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 TPM2P07951 284 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 PYGMP11217 842 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 IL4RP24394 825 aa8.43□□□□□ -1.06
SMG1-216ENST00000569122 PBX1P40424 430 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms