RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 PMEPA1Q969W9 287 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 BBC3Q96PG8 261 aaPredicted RBP19.88■□□□□ 0.77
CLK3-225ENST00000569063 ASPSCR1Q9BZE9 553 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 ZDHHC3Q9NYG2 299 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 PAK5Q9P286 719 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 PSMD13Q9UNM6 376 aa19.88■□□□□ 0.77
CLK3-225ENST00000569063 C17orf113A0A1B0GUU1 675 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 E7EVH7 732 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 TOX3O15405 576 aaPredicted RBP19.87■□□□□ 0.77
CLK3-225ENST00000569063 EFSO43281 561 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 ETS1P14921 441 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 TYRP1P17643 537 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 ACRV1P26436 265 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 PRLHRP49683 370 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 CDKN1CP49918 316 aaPredicted RBP19.87■□□□□ 0.77
CLK3-225ENST00000569063 RAB15P59190 212 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 MC2RQ01718 297 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 SKIDA1Q1XH10 827 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 ZRANB3Q5FWF4 1079 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 DCAF12Q5T6F0 453 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 CCDC89Q8N998 374 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 DNAAF3Q8N9W5 541 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 GLIS1Q8NBF1 620 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 NAT14Q8WUY8 206 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 C9orf72Q96LT7 481 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 RAB33BQ9H082 229 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 FBXO8Q9NRD0 319 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 RAB6BQ9NRW1 208 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 PCDHB11Q9Y5F2 797 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 B3GALT1Q9Y5Z6 326 aa19.87■□□□□ 0.77
CLK3-225ENST00000569063 PTPRQQ9UMZ3 2332 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 STMND1H3BQB6 276 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 CAPN5O15484 640 aaPredicted RBP19.86■□□□□ 0.77
CLK3-225ENST00000569063 GAS8O95995 478 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 FGGP02679 453 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 MTHFD1P11586 935 aaKnown RBP19.86■□□□□ 0.77
CLK3-225ENST00000569063 CAPZBP47756 277 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 LMAN1P49257 510 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 GFERP55789 205 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 CACNG1Q06432 222 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 LAMB3Q13751 1172 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 PRUNE1Q86TP1 453 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 SERPINA9Q86WD7 417 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 LSM14AQ8ND56 463 aaKnown RBP19.86■□□□□ 0.77
CLK3-225ENST00000569063 GPR150Q8NGU9 434 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 ZFPM2Q8WW38 1151 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 WWP1Q9H0M0 922 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 EPHA6Q9UF33 1036 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 KLHL3Q9UH77 587 aa19.86■□□□□ 0.77
CLK3-225ENST00000569063 ATXN7O15265 892 aaPredicted RBP19.85■□□□□ 0.77
CLK3-225ENST00000569063 RPL22P35268 128 aaKnown RBP19.85■□□□□ 0.77
CLK3-225ENST00000569063 RHDQ02161 417 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 ANKS6Q68DC2 871 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 CAPRIN2Q6IMN6 1127 aaKnown RBP19.85■□□□□ 0.77
CLK3-225ENST00000569063 C4orf22Q6V702 233 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 PPP1R21Q6ZMI0 780 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 TAS2R42Q7RTR8 314 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 PIANPQ8IYJ0 282 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 CFAP206Q8IYR0 622 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 HM13Q8TCT9 377 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 RSC1A1Q92681 617 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 TGM7Q96PF1 710 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 TEFMQ96QE5 360 aaKnown RBP19.85■□□□□ 0.77
CLK3-225ENST00000569063 RANBP9Q96S59 729 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 INSM2Q96T92 566 aaPredicted RBP19.85■□□□□ 0.77
CLK3-225ENST00000569063 ZPBPQ9BS86 351 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 CCM2Q9BSQ5 444 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 GRPEL1Q9HAV7 217 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 CASS4Q9NQ75 786 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 RIMKLBQ9ULI2 386 aa19.85■□□□□ 0.77
CLK3-225ENST00000569063 HEATR9A2RTY3 570 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 ERVH48-1M5A8F1 160 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 TK2O00142 265 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 CEP104O60308 925 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 APRTP07741 180 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 SLC35G4P0C7Q5 338 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 ZSCAN5DPP0CG00 497 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 PRSS56P0CW18 603 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 ADRA1DP25100 572 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 GRIA1P42261 906 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 LEPRP48357 1165 aaKnown RBP19.84■□□□□ 0.77
CLK3-225ENST00000569063 ZNF658BQ4V348 819 aaPredicted RBP19.84■□□□□ 0.77
CLK3-225ENST00000569063 CCDC38Q502W7 563 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 MANEAQ5SRI9 462 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 MICALCLQ6ZW33 695 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 PRSS42Q7Z5A4 293 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 OR13J1Q8NGT2 312 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 ZDHHC12Q96GR4 267 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 ZNF768Q9H5H4 540 aaKnown RBP19.84■□□□□ 0.77
CLK3-225ENST00000569063 HOMER3Q9NSC5 361 aa19.84■□□□□ 0.77
CLK3-225ENST00000569063 IMP3Q9NV31 184 aaKnown RBP19.84■□□□□ 0.77
CLK3-225ENST00000569063 SIDT1Q9NXL6 827 aaKnown RBP19.84■□□□□ 0.77
CLK3-225ENST00000569063 CFAP20Q9Y6A4 193 aaKnown RBP19.84■□□□□ 0.77
CLK3-225ENST00000569063 AP2A2O94973 939 aa19.83■□□□□ 0.77
CLK3-225ENST00000569063 GSTM1P09488 218 aa19.83■□□□□ 0.77
CLK3-225ENST00000569063 MSNP26038 577 aaKnown RBP19.83■□□□□ 0.77
CLK3-225ENST00000569063 CXCR5P32302 372 aa19.83■□□□□ 0.77
CLK3-225ENST00000569063 GSTM4Q03013 218 aa19.83■□□□□ 0.77
CLK3-225ENST00000569063 SRSF6Q13247 344 aaKnown RBP19.83■□□□□ 0.77
CLK3-225ENST00000569063 DBN1Q16643 649 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms