RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 C6orf132Q5T0Z8 1188 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 METRNLQ641Q3 311 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 FAM83HQ6ZRV2 1179 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-224ENST00000568877 NAXDQ8IW45 347 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 CTAGE3PQ8IX95 158 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 KRT222Q8N1A0 295 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 HM13Q8TCT9 377 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 LKAAEAR1Q8TD35 194 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 RHBDD1Q8TEB9 315 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 ELMO1Q92556 727 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 AARSD1Q9BTE6 412 aaKnown RBP16.44■□□□□ 0.22
COMMD4-224ENST00000568877 PRDM8Q9NQV8 689 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 TXNDC16Q9P2K2 825 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 FAM8A1Q9UBU6 413 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 RAB21Q9UL25 225 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 PSAT1Q9Y617 370 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 COMMD10Q9Y6G5 202 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 KNL1Q8NG31 2342 aa16.44■□□□□ 0.22
COMMD4-224ENST00000568877 EP300Q09472 2414 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-224ENST00000568877 A0A087WUV0 522 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-224ENST00000568877 RIPK2O43353 540 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 SIGLEC6O43699 453 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 SNX2O60749 519 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 NIPSNAP2O75323 286 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 CHRM3P20309 590 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 NAB1Q13506 487 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 ZCCHC8Q6NZY4 707 aaKnown RBP16.43■□□□□ 0.22
COMMD4-224ENST00000568877 OGFOD3Q6PK18 319 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 XKR5Q6UX68 686 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 WASH2PQ6VEQ5 465 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 PPM1NQ8N819 430 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 FAM181AQ8N9Y4 354 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 ZDHHC1Q8WTX9 485 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 CYTH2Q99418 400 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 CPNE1Q99829 537 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 ACSS3Q9H6R3 686 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 COG4Q9H9E3 785 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 WASH6PQ9NQA3 447 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 PCOLCE2Q9UKZ9 415 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 ACSL5Q9ULC5 683 aa16.43■□□□□ 0.22
COMMD4-224ENST00000568877 CORO1CQ9ULV4 474 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-224ENST00000568877 ZNF292O60281 2723 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 A6NCN8 305 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 PDZK1P1A8MUH7 402 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 B4DGG1 531 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 LIN7AO14910 233 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-224ENST00000568877 EML2O95834 649 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 ABHD2P08910 425 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 F3P13726 295 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 RPL10P27635 214 aaKnown RBP16.42■□□□□ 0.22
COMMD4-224ENST00000568877 AOAHP28039 575 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 CCR7P32248 378 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 ABCG1P45844 678 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 CSE1LP55060 971 aaKnown RBP16.42■□□□□ 0.22
COMMD4-224ENST00000568877 EFTUD2Q15029 972 aaKnown RBP eCLIP16.42■□□□□ 0.221e-7■■■■■ 52.3
COMMD4-224ENST00000568877 SEPT7Q16181 437 aaKnown RBP16.42■□□□□ 0.22
COMMD4-224ENST00000568877 AGAP9Q5VTM2 703 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 EMBQ6PCB8 327 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 ABRAXAS1Q6UWZ7 409 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 NAPRTQ6XQN6 538 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 PIP4P1Q86T03 277 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 ZC3HC1Q86WB0 502 aaKnown RBP16.42■□□□□ 0.22
COMMD4-224ENST00000568877 LILRA3Q8N6C8 439 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-224ENST00000568877 UHMK1Q8TAS1 419 aaKnown RBP16.42■□□□□ 0.22
COMMD4-224ENST00000568877 AENQ8WTP8 325 aaKnown RBP16.42■□□□□ 0.22
COMMD4-224ENST00000568877 KCNJ9Q92806 393 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 GLMNQ92990 594 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 APOLD1Q96LR9 279 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 CAMK1GQ96NX5 476 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 NDNQ99608 321 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 MCMBPQ9BTE3 642 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 SIRPGQ9P1W8 387 aa16.42■□□□□ 0.22
COMMD4-224ENST00000568877 CDV3Q9UKY7 258 aaKnown RBP16.42■□□□□ 0.22
COMMD4-224ENST00000568877 TDRD6O60522 2096 aaKnown RBP16.41■□□□□ 0.22
COMMD4-224ENST00000568877 SLC5A10A0PJK1 596 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 OR5K4A6NMS3 321 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 E5RI56 91 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 SLC30A4O14863 429 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 KPNA5O15131 536 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 NOBOXO60393 691 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 CBFA2T3O75081 653 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 LDOC1O95751 146 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-224ENST00000568877 SLC2A4P14672 509 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 GP5P40197 560 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 PLOD1Q02809 727 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-224ENST00000568877 ILF2Q12905 390 aaKnown RBP16.41■□□□□ 0.22
COMMD4-224ENST00000568877 RPA4Q13156 261 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 BOP1Q14137 746 aaKnown RBP16.41■□□□□ 0.22
COMMD4-224ENST00000568877 BRD3Q15059 726 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 PROX2Q3B8N5 592 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 SYTL3Q4VX76 610 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 RBM20Q5T481 1227 aaKnown RBP16.41■□□□□ 0.22
COMMD4-224ENST00000568877 GRTP1Q5TC63 336 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 IYDQ6PHW0 289 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 OTOAQ7RTW8 1153 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 SFTPA2Q8IWL1 248 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 SLC35F3Q8IY50 421 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 NAGSQ8N159 534 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 ARL10Q8N8L6 244 aa16.41■□□□□ 0.22
COMMD4-224ENST00000568877 GPR156Q8NFN8 814 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms