RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 RBM15Q96T37 977 aaKnown RBP eCLIP5.64□□□□□ -1.51
CDH13-211ENST00000568770 WRAP53Q9BUR4 548 aaKnown RBP5.64□□□□□ -1.51
CDH13-211ENST00000568770 C1QTNF7Q9BXJ2 289 aa5.64□□□□□ -1.51
CDH13-211ENST00000568770 TM6SF2Q9BZW4 377 aa5.64□□□□□ -1.51
CDH13-211ENST00000568770 TKTL2Q9H0I9 626 aa5.64□□□□□ -1.51
CDH13-211ENST00000568770 MPP6Q9NZW5 540 aa5.64□□□□□ -1.51
CDH13-211ENST00000568770 AKAP7Q9P0M2 348 aaPredicted RBP5.64□□□□□ -1.51
CDH13-211ENST00000568770 LRIT1Q9P2V4 623 aa5.64□□□□□ -1.51
CDH13-211ENST00000568770 HECAQ9UBI9 543 aaPredicted RBP5.64□□□□□ -1.51
CDH13-211ENST00000568770 USP25Q9UHP3 1055 aa5.64□□□□□ -1.51
CDH13-211ENST00000568770 ACTL7AQ9Y615 435 aa5.64□□□□□ -1.51
CDH13-211ENST00000568770 IGHV5-10-1A0A0J9YXX1 117 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 ILVBLA1L0T0 632 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 A1L4Q6 167 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 DRGXA6NNA5 263 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 TMEM110-MUSTN1A8MSY1 372 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 K7EM74 188 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 AREL1O15033 823 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 SLC16A3O15427 465 aaKnown RBP5.63□□□□□ -1.51
CDH13-211ENST00000568770 B4GAT1O43505 415 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 MED7O43513 233 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 NUDT21O43809 227 aaKnown RBP5.63□□□□□ -1.51
CDH13-211ENST00000568770 DUX1O43812 170 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 HSF2BPO75031 334 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 SRGAP2O75044 1071 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 VPS4BO75351 444 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 KRT38O76015 456 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 LETM1O95202 739 aaPredicted RBP5.63□□□□□ -1.51
CDH13-211ENST00000568770 CPNE6O95741 557 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 CD160O95971 181 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 UGT2B4P06133 528 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 RNF224P0DH78 156 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 OSMP13725 252 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 NR1D1P20393 614 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 GNLYP22749 145 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 OAS2P29728 719 aaKnown RBP5.63□□□□□ -1.51
CDH13-211ENST00000568770 MTNR1BP49286 362 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 FMO5P49326 533 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 OR1D5P58170 312 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 SLC20A2Q08357 652 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 CDC20Q12834 499 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 MTA1Q13330 715 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 HLTFQ14527 1009 aaKnown RBP eCLIP5.63□□□□□ -1.51
CDH13-211ENST00000568770 NFATC4Q14934 902 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 ODF1Q14990 250 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 RNF151Q2KHN1 245 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 DEFB109BQ30KR1 87 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 C14orf28Q4W4Y0 310 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 EFHC1Q5JVL4 640 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 FHL5Q5TD97 284 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 OTUD1Q5VV17 481 aaPredicted RBP5.63□□□□□ -1.51
CDH13-211ENST00000568770 SPOCD1Q6ZMY3 1216 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 TAF8Q7Z7C8 310 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 ARHGEF19Q8IW93 802 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 RAVER1Q8IY67 606 aaKnown RBP5.63□□□□□ -1.51
CDH13-211ENST00000568770 CDYL2Q8N8U2 506 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 LMO3Q8TAP4 145 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 CXorf40AQ8TE69 158 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 SSC4DQ8WTU2 575 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 ART4Q93070 314 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 SLC45A3Q96JT2 553 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 KLHL32Q96NJ5 620 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 NT5C1BQ96P26 610 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 CPXM1Q96SM3 734 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 NUDT22Q9BRQ3 303 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 APOOQ9BUR5 198 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 CDH19Q9H159 772 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 DPEP2Q9H4A9 486 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 WDCPQ9H6R7 721 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 UPF2Q9HAU5 1272 aaKnown RBP5.63□□□□□ -1.51
CDH13-211ENST00000568770 METTL14Q9HCE5 456 aaKnown RBP5.63□□□□□ -1.51
CDH13-211ENST00000568770 ACP6Q9NPH0 428 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 PIGVQ9NUD9 493 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 ARHGEF38Q9NXL2 777 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 ZNF212Q9UDV6 495 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 KLQ9UEF7 1012 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 ARMCX3Q9UH62 379 aaPredicted RBP5.63□□□□□ -1.51
CDH13-211ENST00000568770 VPS4AQ9UN37 437 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 TP53TG5Q9Y2B4 290 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 OR1A2Q9Y585 309 aa5.63□□□□□ -1.51
CDH13-211ENST00000568770 IGLV3-10A0A075B6K4 115 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 LOC101059948A0A1B0GTJ6 334 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 EFCAB7A8K855 629 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 MATN2O00339 956 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 THAP12O43422 761 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 PRICKLE3O43900 615 aaPredicted RBP5.62□□□□□ -1.51
CDH13-211ENST00000568770 RAD1O60671 282 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 SEC24DO94855 1032 aaPredicted RBP5.62□□□□□ -1.51
CDH13-211ENST00000568770 TNFP01375 233 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 PRKCGP05129 697 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 RBP3P10745 1247 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 KRT5P13647 590 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 CMA1P23946 247 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 ALDH4A1P30038 563 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 PRCPP42785 496 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 SYKP43405 635 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 CXCR3P49682 368 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 NDUFA8P51970 172 aa5.62□□□□□ -1.51
CDH13-211ENST00000568770 FKBP3Q00688 224 aaKnown RBP5.62□□□□□ -1.51
CDH13-211ENST00000568770 GCNT1Q02742 428 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms