RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 GBE1Q04446 702 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 KLHL30Q0D2K2 578 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 ABRQ12979 859 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 NAA30Q147X3 362 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 NCF4Q15080 339 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 KYNUQ16719 465 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 HADHQ16836 314 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 ATP13A5Q4VNC0 1218 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 PRAMEF17Q5VTA0 474 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 LYPLAL1Q5VWZ2 237 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 E4F1Q66K89 784 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 ARMC6Q6NXE6 501 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 RAB43Q86YS6 212 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 SYTL1Q8IYJ3 562 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 CCNYQ8ND76 341 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 BRSK1Q8TDC3 778 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 LRRN4Q8WUT4 740 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 CLIP3Q96DZ5 547 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 BTBD6Q96KE9 485 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 RANBP9Q96S59 729 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 SRPK1Q96SB4 655 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 TLR10Q9BXR5 811 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 ZCCHC2Q9C0B9 1178 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 ILKAPQ9H0C8 392 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 SYTL2Q9HCH5 934 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 IMP3Q9NV31 184 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 PCMTD2Q9NV79 361 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 AIPL1Q9NZN9 384 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 TMPRSS11EQ9UL52 423 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 PSMD13Q9UNM6 376 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 PADI2Q9Y2J8 665 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 CSMD2Q7Z408 3487 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 ADGRG4Q8IZF6 3080 aa11.51□□□□□ -0.57
GTF3C1-209ENST00000568569 C9J4A7 227 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 POP7O75817 140 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 CAPN1P07384 714 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 CYP2A7P20853 494 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 IFI35P80217 286 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 ZBTB17Q13105 803 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 XRCC4Q13426 336 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 IGFL3Q6UXB1 125 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 MRGPREQ86SM8 312 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 MAP7D3Q8IWC1 876 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 CNTD1Q8N815 330 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 CLEC1AQ8NC01 280 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 KCTD6Q8NC69 237 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 UBE2Q2Q8WVN8 375 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 ZFPM2Q8WW38 1151 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 TM9SF4Q92544 642 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 FER1L6-AS2Q96M78 137 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 ZNF830Q96NB3 372 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 IP6K3Q96PC2 410 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 BARD1Q99728 777 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 ACTR5Q9H9F9 607 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 ENTPD4Q9Y227 616 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 GTF3C3Q9Y5Q9 886 aa11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 COPG1Q9Y678 874 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 CFAP20Q9Y6A4 193 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-209ENST00000568569 OR6C74A6NCV1 312 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 F5H423 210 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 MYO1FO00160 1098 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 IPO13O94829 963 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 MSL3P1P0C860 447 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 OTX2P32243 289 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 GJC1P36383 396 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 KPNA2P52292 529 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 CTSCP53634 463 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 PER3P56645 1201 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 ADCY2Q08462 1091 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 PPIDQ08752 370 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 SLC10A2Q12908 348 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 PRKAA1Q13131 559 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 NFE2L1Q14494 772 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 MYBPC3Q14896 1274 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 PDK2Q15119 407 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 SLC14A2Q15849 920 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 PCSK7Q16549 785 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 PTCHD3Q3KNS1 767 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 ZNF789Q5FWF6 425 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 LDLRAP1Q5SW96 308 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 ZDHHC20Q5W0Z9 365 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 CCDC70Q6NSX1 233 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 FAM83HQ6ZRV2 1179 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 NT5DC3Q86UY8 548 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 PQLC3Q8N755 202 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 BEND7Q8N7W2 519 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 ST6GALNAC3Q8NDV1 305 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 FAF2Q96CS3 445 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 IMP4Q96G21 291 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 DPH2Q9BQC3 489 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 DHRS4Q9BTZ2 278 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 SLC7A5P2Q9GIP4 190 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 THAP2Q9H0W7 228 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 KIR3DX1Q9H7L2 352 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 CBX8Q9HC52 389 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 BPIFA1Q9NP55 256 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 AGPAT4Q9NRZ5 378 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 ANO10Q9NW15 660 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 PCDHGA10Q9Y5H3 936 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms