RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ZNF574Q6ZN55 896 aaPredicted RBP12.75□□□□□ -0.37
CNOT1-213ENST00000568158 RBM44Q6ZP01 1051 aaKnown RBP12.75□□□□□ -0.37
CNOT1-213ENST00000568158 B3GNT8Q7Z7M8 397 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 TMEM135Q86UB9 458 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 ZNF669Q96BR6 464 aaPredicted RBP12.75□□□□□ -0.37
CNOT1-213ENST00000568158 DEPDC7Q96QD5 511 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 INSM2Q96T92 566 aaPredicted RBP12.75□□□□□ -0.37
CNOT1-213ENST00000568158 TTC1Q99614 292 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 TBC1D10AQ9BXI6 508 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 FOXP3Q9BZS1 431 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 WWP1Q9H0M0 922 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 RDH14Q9HBH5 336 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 SARS2Q9NP81 518 aaKnown RBP12.75□□□□□ -0.37
CNOT1-213ENST00000568158 KCNK4Q9NYG8 393 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 SAMD15Q9P1V8 674 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 CDC23Q9UJX2 597 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 ENTPD2Q9Y5L3 495 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 CFAP20Q9Y6A4 193 aaKnown RBP12.75□□□□□ -0.37
CNOT1-213ENST00000568158 MAD1L1Q9Y6D9 718 aa12.75□□□□□ -0.37
CNOT1-213ENST00000568158 ZCWPW2A0A1B0GU75 182 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 C17orf113A0A1B0GUU1 675 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 FAM187AA6NFU0 413 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 IQCF5A8MTL0 148 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 TP73O15350 636 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 AP2A2O94973 939 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 F7P08709 466 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-213ENST00000568158 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-213ENST00000568158 PDHA2P29803 388 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 RPL21P46778 160 aaKnown RBP12.74□□□□□ -0.37
CNOT1-213ENST00000568158 PPM1FP49593 454 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-213ENST00000568158 RPE65Q16518 533 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 BBS9Q3SYG4 887 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 ZNF658BQ4V348 819 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-213ENST00000568158 PACS1Q6VY07 963 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 PIM3Q86V86 326 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 HOOK3Q86VS8 718 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 IGDCC3Q8IVU1 814 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 TRIM48Q8IWZ4 208 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 OTUD6BQ8N6M0 293 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 WDR48Q8TAF3 677 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 SH3KBP1Q96B97 665 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 CXorf40BQ96DE9 158 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 ATXN7L3BQ96GX2 97 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 NUDT22Q9BRQ3 303 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 DPH5Q9H2P9 285 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 SEMA6CQ9H3T2 930 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 ACSL5Q9ULC5 683 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 RPS6KL1Q9Y6S9 549 aa12.74□□□□□ -0.37
CNOT1-213ENST00000568158 AKAP13Q12802 2813 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 NDUFS3O75489 264 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 TCEA3O75764 348 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 SEC31AO94979 1220 aaKnown RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 OR56A5P0C7T3 313 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 MPSTP25325 297 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 PPARGP37231 505 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 HALP42357 657 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 MAPK9P45984 424 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 PREPP48147 710 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 PDX1P52945 283 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 CYP4F3Q08477 520 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 MORF4L2Q15014 288 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 ZNF789Q5FWF6 425 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 KIAA0930Q6ICG6 404 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 CAPRIN2Q6IMN6 1127 aaKnown RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 NEPROQ6NW34 567 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 DUS1LQ6P1R4 473 aaKnown RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 UNQ6494/PRO21346Q6UXR6 183 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 TMEM26Q6ZUK4 368 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 ZNF572Q7Z3I7 529 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 MAATS1Q7Z4T9 603 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 SDCCAG8Q86SQ7 713 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 UNC5BQ8IZJ1 945 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 PHC3Q8NDX5 983 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 GPR150Q8NGU9 434 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 MDM1Q8TC05 714 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 HM13Q8TCT9 377 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 JPH3Q8WXH2 748 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 ELMO1Q92556 727 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 STAMBPL1Q96FJ0 436 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 SNF8Q96H20 258 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 AHCYL2Q96HN2 611 aaKnown RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 C12orf66Q96MD2 445 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 EBNA1BP2Q99848 306 aaKnown RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 ERP44Q9BS26 406 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 STN1Q9H668 368 aaKnown RBP12.73□□□□□ -0.37
CNOT1-213ENST00000568158 COG4Q9H9E3 785 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 SLC40A1Q9NP59 571 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 TMEM9Q9P0T7 183 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 FAM169AQ9Y6X4 670 aa12.73□□□□□ -0.37
CNOT1-213ENST00000568158 A0A1W2PNU3 283 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-213ENST00000568158 PMS2P1A4D2B8 440 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 D6RAR5 112 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 PRMT5O14744 637 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-213ENST00000568158 ZW10O43264 779 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 USP1O94782 785 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 CPNE6O95741 557 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 CAPNS1P04632 268 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 TYRP1P17643 537 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 PAMP19021 973 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms