RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 NOP9Q86U38 636 aaKnown RBP13.42□□□□□ -0.26
SMG1-213ENST00000567737 LRRTM4Q86VH4 590 aa13.42□□□□□ -0.26
SMG1-213ENST00000567737 TGIF2LYQ8IUE0 185 aa13.42□□□□□ -0.26
SMG1-213ENST00000567737 CHDHQ8NE62 594 aaPredicted RBP13.42□□□□□ -0.26
SMG1-213ENST00000567737 THAP11Q96EK4 314 aa13.42□□□□□ -0.26
SMG1-213ENST00000567737 SPOCK3Q9BQ16 436 aa13.42□□□□□ -0.26
SMG1-213ENST00000567737 TIMM29Q9BSF4 260 aa13.42□□□□□ -0.26
SMG1-213ENST00000567737 TLR10Q9BXR5 811 aa13.42□□□□□ -0.26
SMG1-213ENST00000567737 FAM83DQ9H4H8 585 aa13.42□□□□□ -0.26
SMG1-213ENST00000567737 GPN3Q9UHW5 284 aaPredicted RBP13.42□□□□□ -0.26
SMG1-213ENST00000567737 BTRCQ9Y297 605 aa13.42□□□□□ -0.26
SMG1-213ENST00000567737 PCDHGB6Q9Y5F9 930 aa13.42□□□□□ -0.26
SMG1-213ENST00000567737 OR5K3A6NET4 321 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 TMEM150CB9EJG8 249 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 SLC25A14O95258 325 aaPredicted RBP13.41□□□□□ -0.26
SMG1-213ENST00000567737 CLDN14O95500 239 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 CD63P08962 238 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 HBQ1P09105 142 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 ERCC2P18074 760 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 VCLP18206 1134 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 CASP6P55212 293 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 ZNF648Q5T619 568 aaPredicted RBP13.41□□□□□ -0.26
SMG1-213ENST00000567737 ARMC6Q6NXE6 501 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 WDR59Q6PJI9 974 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 B4GALNT4Q76KP1 1039 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 OOSP2Q86WS3 158 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 CARFQ8N187 725 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 NPWQ8N729 165 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 NR4A3Q92570 626 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 WDR24Q96S15 920 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 GSX1Q9H4S2 264 aaPredicted RBP13.41□□□□□ -0.26
SMG1-213ENST00000567737 SYTL2Q9HCH5 934 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 TRIM39Q9HCM9 518 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 HRASLS2Q9NWW9 162 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 PKD2L2Q9NZM6 624 aa13.41□□□□□ -0.26
SMG1-213ENST00000567737 HOOK1Q9UJC3 728 aaKnown RBP13.41□□□□□ -0.26
SMG1-213ENST00000567737 CCDC78A2IDD5 438 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 CHUKO15111 745 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 DDX3YO15523 660 aaKnown RBP13.4□□□□□ -0.26
SMG1-213ENST00000567737 VEGFDO43915 354 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 FZD6O60353 706 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 UNC5CO95185 931 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 HSP90AA1P07900 732 aaKnown RBP13.4□□□□□ -0.26
SMG1-213ENST00000567737 ESRRAP11474 423 aaPredicted RBP13.4□□□□□ -0.26
SMG1-213ENST00000567737 DESP17661 470 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 KLK2P20151 261 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 IL4RP24394 825 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 SPINT3P49223 89 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 ZNF143P52747 638 aaPredicted RBP13.4□□□□□ -0.26
SMG1-213ENST00000567737 RBPJQ06330 500 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 QPCTQ16769 361 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 ZNF569Q5MCW4 686 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 PRAMEF13Q5VWM6 474 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 ADGRG6Q86SQ4 1221 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 GPR150Q8NGU9 434 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 OR1L3Q8NH93 324 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 SLC30A5Q8TAD4 765 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 NSMCE1Q8WV22 266 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 TEKT4Q8WW24 435 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 GPATCH2LQ9NWQ4 482 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 NDOR1Q9UHB4 597 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 SERTAD3Q9UJW9 196 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 MAN1B1Q9UKM7 699 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 AP4E1Q9UPM8 1137 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 FHOD1Q9Y613 1164 aa13.4□□□□□ -0.26
SMG1-213ENST00000567737 C1orf232A0A0U1RR37 186 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 ANKRD62A6NC57 917 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 EIF3CLB5ME19 914 aaKnown RBP13.39□□□□□ -0.27
SMG1-213ENST00000567737 E7EQ34 232 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 AGPSO00116 658 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 MMP13P45452 471 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 ADORA2A-AS1P86434 159 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 ZNF789Q5FWF6 425 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 FAAH2Q6GMR7 532 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 RFX8Q6ZV50 586 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 PPP1R32Q7Z5V6 425 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 OR2Y1Q8NGV0 311 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 CCHCR1Q8TD31 782 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 EPS8L1Q8TE68 723 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 CPLX3Q8WVH0 158 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 PTERQ96BW5 349 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 EIF3CQ99613 913 aaKnown RBP13.39□□□□□ -0.27
SMG1-213ENST00000567737 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
SMG1-213ENST00000567737 SPATA16Q9BXB7 569 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 DHX35Q9H5Z1 703 aaKnown RBP13.39□□□□□ -0.27
SMG1-213ENST00000567737 PLSCR2Q9NRY7 297 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 SEMA3GQ9NS98 782 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 WDR37Q9Y2I8 494 aa13.39□□□□□ -0.27
SMG1-213ENST00000567737 CCDC66A2RUB6 948 aa13.38□□□□□ -0.27
SMG1-213ENST00000567737 RGSL1A5PLK6 1076 aa13.38□□□□□ -0.27
SMG1-213ENST00000567737 SLC9B1P1A6NJY1 282 aa13.38□□□□□ -0.27
SMG1-213ENST00000567737 PEX11BO96011 259 aa13.38□□□□□ -0.27
SMG1-213ENST00000567737 CYP1A1P04798 512 aaPredicted RBP13.38□□□□□ -0.27
SMG1-213ENST00000567737 CDH3P22223 829 aa13.38□□□□□ -0.27
SMG1-213ENST00000567737 PREPP48147 710 aa13.38□□□□□ -0.27
SMG1-213ENST00000567737 GSCP56915 257 aaPredicted RBP13.38□□□□□ -0.27
SMG1-213ENST00000567737 CSNK1G2P78368 415 aa13.38□□□□□ -0.27
SMG1-213ENST00000567737 INAQ16352 499 aa13.38□□□□□ -0.27
SMG1-213ENST00000567737 ANKRD20A8PQ5CZ79 823 aa13.38□□□□□ -0.27
SMG1-213ENST00000567737 MARC1Q5VT66 337 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms