RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GSTM4Q03013 218 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 CRYMQ14894 314 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 TRADDQ15628 312 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 AARS2Q5JTZ9 985 aaKnown RBP12.17□□□□□ -0.46
RNF40-211ENST00000567365 HES3Q5TGS1 186 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 STEAP4Q687X5 459 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 CAPRIN2Q6IMN6 1127 aaKnown RBP12.17□□□□□ -0.46
RNF40-211ENST00000567365 NEPROQ6NW34 567 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 CASC4Q6P4E1 433 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 ZDHHC24Q6UX98 284 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 UNC5BQ8IZJ1 945 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 PDIK1LQ8N165 341 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 MMGT1Q8N4V1 131 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 NOA1Q8NC60 698 aaKnown RBP12.17□□□□□ -0.46
RNF40-211ENST00000567365 KIF18AQ8NI77 898 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 WDR48Q8TAF3 677 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 MAPK15Q8TD08 544 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 LPGAT1Q92604 370 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 ZNF592Q92610 1267 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.17□□□□□ -0.46
RNF40-211ENST00000567365 LRRC39Q96DD0 335 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 TCF12Q99081 682 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 NAT9Q9BTE0 207 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 OR52A5Q9H2C5 316 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 COG4Q9H9E3 785 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 IL1RAPL1Q9NZN1 696 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 CPNE7Q9UBL6 633 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 ANAPC5Q9UJX4 755 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 ACSL5Q9ULC5 683 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 USP24Q9UPU5 2620 aa12.17□□□□□ -0.46
RNF40-211ENST00000567365 ZZEF1O43149 2961 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 SLC5A10A0PJK1 596 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 OR52A4PA6NMU1 304 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 PRMT5O14744 637 aaPredicted RBP12.16□□□□□ -0.46
RNF40-211ENST00000567365 NDC80O14777 642 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 SNX2O60749 519 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 TCEA3O75764 348 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 TTC4O95801 387 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 S1PR4O95977 384 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 PROS1P07225 676 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 SLC2A4P14672 509 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 RPL10P27635 214 aaKnown RBP12.16□□□□□ -0.46
RNF40-211ENST00000567365 CCL7P80098 99 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 FRG1Q14331 258 aaKnown RBP12.16□□□□□ -0.46
RNF40-211ENST00000567365 RPE65Q16518 533 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 HIF1AQ16665 826 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 CCDC157Q569K6 752 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 MARCH9Q86YJ5 346 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 CILP2Q8IUL8 1156 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 CCNJLQ8IV13 435 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 GALNT15Q8N3T1 639 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 BBOF1Q8ND07 529 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 LKAAEAR1Q8TD35 194 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 ART4Q93070 314 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 RMDN2Q96LZ7 410 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 BIRC8Q96P09 236 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 CCM2Q9BSQ5 444 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 LRRC1Q9BTT6 524 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 CARD6Q9BX69 1037 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 DPH5Q9H2P9 285 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 LRRN3Q9H3W5 708 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 OSGEPL1Q9H4B0 414 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 UCK1Q9HA47 277 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 SAMD15Q9P1V8 674 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 CDYLQ9Y232 598 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 MSRB2Q9Y3D2 182 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 MAD1L1Q9Y6D9 718 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
RNF40-211ENST00000567365 TRBV23OR9-2A0A075B6M9 112 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 IGHV1OR21-1A0A087WYE8 117 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 PRAMEF33A0A0G2JMD5 474 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 PDZK1P1A8MUH7 402 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 D6RAR5 112 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 MT-CO3P00414 261 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 CAPNS1P04632 268 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 POLBP06746 335 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 PAMP19021 973 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 CD1CP29017 333 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 PDHA2P29803 388 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 ELK3P41970 407 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 ARL4CP56559 192 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 OR1D5P58170 312 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 HHEXQ03014 270 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 CFHR1Q03591 330 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 RPA4Q13156 261 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 FASTKD3Q14CZ7 662 aaKnown RBP12.15□□□□□ -0.46
RNF40-211ENST00000567365 BBS9Q3SYG4 887 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 DNAJC21Q5F1R6 531 aaKnown RBP12.15□□□□□ -0.46
RNF40-211ENST00000567365 ZNF789Q5FWF6 425 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 SPANXN3Q5MJ09 141 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 CTSL3PQ5NE16 218 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 MRNIPQ6NTE8 343 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 UNC5AQ6ZN44 842 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 TMPRSS9Q7Z410 1059 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 LRRC6Q86X45 466 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 DENND6AQ8IWF6 608 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 CNTN4Q8IWV2 1026 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 CFAP206Q8IYR0 622 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 AVL9Q8NBF6 648 aa12.15□□□□□ -0.46
RNF40-211ENST00000567365 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms