RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CCDC28BQ9BUN5 200 aa19.24■□□□□ 0.67
CLN6-205ENST00000564846 CCDC106Q9BWC9 280 aa19.24■□□□□ 0.67
CLN6-205ENST00000564846 ZCCHC2Q9C0B9 1178 aaKnown RBP19.24■□□□□ 0.67
CLN6-205ENST00000564846 EPHX3Q9H6B9 360 aa19.24■□□□□ 0.67
CLN6-205ENST00000564846 UBE2ZQ9H832 354 aaPredicted RBP19.24■□□□□ 0.67
CLN6-205ENST00000564846 HEBP1Q9NRV9 189 aa19.24■□□□□ 0.67
CLN6-205ENST00000564846 ARMCX1Q9P291 453 aa19.24■□□□□ 0.67
CLN6-205ENST00000564846 LIMD1Q9UGP4 676 aa19.24■□□□□ 0.67
CLN6-205ENST00000564846 CNOT6Q9ULM6 557 aaKnown RBP19.24■□□□□ 0.67
CLN6-205ENST00000564846 XIRP2A4UGR9 3374 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 CAPN14A8MX76 684 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 INPP4BO15327 924 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 CDK14O94921 469 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 CBX6O95503 412 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 MLYCDO95822 493 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 MPC1LP0DKB6 136 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 VCLP18206 1134 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 RPS14P62263 151 aaKnown RBP19.23■□□□□ 0.67
CLN6-205ENST00000564846 SH3BP2P78314 561 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 HSPA14Q0VDF9 509 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.23■□□□□ 0.67
CLN6-205ENST00000564846 CLYBLQ8N0X4 340 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 RASGEF1AQ8N9B8 481 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 IL17RCQ8NAC3 791 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 ASZ1Q8WWH4 475 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 ELMO1Q92556 727 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 FAM161BQ96MY7 647 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 MID1IP1Q9NPA3 183 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 PCTPQ9UKL6 214 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 ADAMTS6Q9UKP5 1117 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 CAPN7Q9Y6W3 813 aa19.23■□□□□ 0.67
CLN6-205ENST00000564846 CFAP73A6NFT4 308 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 OR2AG2A6NM03 316 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 ATG13O75143 517 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 GLULP15104 373 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 TSPAN8P19075 237 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 CALB2P22676 271 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 PRLHRP49683 370 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 COPAP53621 1224 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 TAS2R38P59533 333 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 BOP1Q14137 746 aaKnown RBP19.22■□□□□ 0.67
CLN6-205ENST00000564846 PCBP2Q15366 365 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLN6-205ENST00000564846 ZNF648Q5T619 568 aaPredicted RBP19.22■□□□□ 0.67
CLN6-205ENST00000564846 NEK10Q6ZWH5 1172 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 ASRGL1Q7L266 308 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 TRPC4APQ8TEL6 797 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 MAELQ96JY0 434 aaKnown RBP19.22■□□□□ 0.67
CLN6-205ENST00000564846 NSUN5Q96P11 429 aaKnown RBP19.22■□□□□ 0.67
CLN6-205ENST00000564846 OR52B2Q96RD2 323 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 TNFRSF12AQ9NP84 129 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 ARL8BQ9NVJ2 186 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 LNPEPQ9UIQ6 1025 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 COLQQ9Y215 455 aaPredicted RBP19.22■□□□□ 0.67
CLN6-205ENST00000564846 CKAP5Q14008 2032 aa19.22■□□□□ 0.67
CLN6-205ENST00000564846 TM7SF2O76062 418 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 JUNP05412 331 aaKnown RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 C8GP07360 202 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 ENO2P09104 434 aaPredicted RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 AOC1P19801 751 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 EPHA3P29320 983 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 AGTR2P50052 363 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 MRPS21P82921 87 aaKnown RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 CDKL4Q5MAI5 379 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 CACUL1Q86Y37 369 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 PTCD3Q96EY7 689 aaKnown RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 PHF7Q9BWX1 381 aaPredicted RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 WDR55Q9H6Y2 383 aaPredicted RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 MEAF6Q9HAF1 191 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 SPTBN5Q9NRC6 3674 aaKnown RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 COL4A2P08572 1712 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 A0A1W2PP55 124 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 K7ESM1 405 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 E2F3O00716 465 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 GPC4O75487 556 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 RNASEH2AO75792 299 aaKnown RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 HOXB2P14652 356 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 NCF2P19878 526 aaPredicted RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 CTSCP53634 463 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 INHBCP55103 352 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 SP140Q13342 867 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 UBAP2LQ14157 1087 aaKnown RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 PHKG1Q16816 387 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 LSM12Q3MHD2 195 aaKnown RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 SULT1C3Q6IMI6 304 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 KIAA1211LQ6NV74 962 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 METTL2BQ6P1Q9 378 aaKnown RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 PELI3Q8N2H9 469 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 OR56A4Q8NGH8 313 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 AGAP11Q8TF27 550 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 CCM2Q9BSQ5 444 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 HGH1Q9BTY7 390 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 LRMDAQ9H2I8 198 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 SEMA4BQ9NPR2 832 aaPredicted RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 PTBP2Q9UKA9 531 aaKnown RBP19.21■□□□□ 0.67
CLN6-205ENST00000564846 FIS1Q9Y3D6 152 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 BRWD1Q9NSI6 2320 aa19.21■□□□□ 0.67
CLN6-205ENST00000564846 GOLGA8QA0A0J9YX86 632 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 GOLGA8OA6NCC3 632 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 E9PBE3 544 aa19.2■□□□□ 0.66
CLN6-205ENST00000564846 GOLGA8NF8WBI6 632 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms