RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ANKRD20A3Q5VUR7 823 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 DARS2Q6PI48 645 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 RASGRP3Q8IV61 690 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 OR2L2Q8NH16 312 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 ACTL9Q8TC94 416 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 APOBEC4Q8WW27 367 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 SEC14L1Q92503 715 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 KRT35Q92764 455 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 ULK4Q96C45 1275 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 MRFAP1L1Q96HT8 127 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 SLC41A2Q96JW4 573 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 CCM2Q9BSQ5 444 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 ARNT2Q9HBZ2 717 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 PADI1Q9ULC6 663 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 KCTD3Q9Y597 815 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 HEBP2Q9Y5Z4 205 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 COLEC10Q9Y6Z7 277 aa11.93□□□□□ -0.5
GTF3C1-204ENST00000564664 BOD1L1Q8NFC6 3051 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 SETXQ7Z333 2677 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 C17orf113A0A1B0GUU1 675 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 TERTO14746 1132 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 SPAG6O75602 509 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 SRP72O76094 671 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 PRAMEF1O95521 474 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 RBP3P10745 1247 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 MTHFD1P11586 935 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 AKT1P31749 480 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 MARCKSL1P49006 195 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 SEPHS1P49903 392 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 CTSCP53634 463 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 NAP1L1P55209 391 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 EIF3EP60228 445 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 OTUD4Q01804 1114 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 GPR33Q49SQ1 333 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 FNBP1LQ5T0N5 605 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 IRGCQ6NXR0 463 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 TXLNBQ8N3L3 684 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 TTC13Q8NBP0 860 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 OR4K2Q8NGD2 314 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 OR8K5Q8NH50 307 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 UBE2Q2Q8WVN8 375 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 STARD8Q92502 1023 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 RSC1A1Q92681 617 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 STAMBPL1Q96FJ0 436 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 DCUN1D1Q96GG9 259 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 FICDQ9BVA6 458 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 GOLPH3Q9H4A6 298 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 ASB8Q9H765 288 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 TRIM10Q9UDY6 481 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 ANAPC2Q9UJX6 822 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 RARRES3Q9UL19 164 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 PCDHGA6Q9Y5G7 932 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 ARL5AQ9Y689 179 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 TENM4Q6N022 2769 aa11.92□□□□□ -0.5
GTF3C1-204ENST00000564664 MYO18BQ8IUG5 2567 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 GOLGA6L9A6NEM1 432 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 OR2AG2A6NM03 316 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 C21orf140B9A014 251 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 CFAP99D6REC4 459 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 MATN2O00339 956 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 KCNN4O15554 427 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 PJA2O43164 708 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 KIF1CO43896 1103 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 ZIC2O95409 532 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 GSTM1P09488 218 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 DLSTP36957 453 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 ARL4DP49703 201 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 SH3BP2P78314 561 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 HSD11B2P80365 405 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 GSTM4Q03013 218 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 MSLNQ13421 630 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 NFE2L1Q14494 772 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 PARP6Q2NL67 630 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 ARMC6Q6NXE6 501 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 FAM83HQ6ZRV2 1179 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 FAM92BQ6ZTR7 304 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 OOSP2Q86WS3 158 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 KLHDC8BQ8IXV7 354 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 UNC5BQ8IZJ1 945 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 SIDT2Q8NBJ9 832 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 SPATA13Q96N96 652 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 GPR87Q9BY21 358 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 SYTL2Q9HCH5 934 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 HRASLS2Q9NWW9 162 aa11.91□□□□□ -0.5
GTF3C1-204ENST00000564664 IGHV5-51A0A0C4DH38 117 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 UBA6A0AVT1 1052 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 OR5K3A6NET4 321 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 TLCD2A6NGC4 264 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 PSMD3O43242 534 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 BUD23O43709 281 aaKnown RBP11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 KIAA0754O94854 1291 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 ZBTB11O95625 1053 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 SLC35G4P0C7Q5 338 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 PRKAR1AP10644 381 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 ATP1B2P14415 290 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 ZNF28P17035 718 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 ITGALP20701 1170 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 XIAPP98170 497 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 PLCL1Q15111 1095 aa11.9□□□□□ -0.5
GTF3C1-204ENST00000564664 DNTTIP2Q5QJE6 756 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms