RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TAAR9Q96RI9 348 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 RANBP9Q96S59 729 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 NAP1L3Q99457 506 aaPredicted RBP17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 VPS37BQ9H9H4 285 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 WDR70Q9NW82 654 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 TRMT1Q9NXH9 659 aaKnown RBP17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 KLHL3Q9UH77 587 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 PRAMEF33A0A0G2JMD5 474 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 AP3B1O00203 1094 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 KIF5CO60282 957 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 PRAMEF10O60809 474 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 POLBP06746 335 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 SLC35G4P0C7Q5 338 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 PRSS56P0CW18 603 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 FGF3P11487 239 aaPredicted RBP17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 PSMA3P25788 255 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 PRLHRP49683 370 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 UCNP55089 124 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 GPR18Q14330 331 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 GSE1Q14687 1217 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 TSTD2Q5T7W7 516 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 NLRP9Q7RTR0 991 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 FAM129CQ86XR2 697 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 SLC35F6Q8N357 371 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 RASGEF1CQ8N431 466 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 PRELID2Q8N945 189 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 PPHLN1Q8NEY8 458 aaKnown RBP17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 CRELD1Q96HD1 420 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 CCM2Q9BSQ5 444 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 WWP1Q9H0M0 922 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 KCNF1Q9H3M0 494 aa17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 EIF2B3Q9NR50 452 aaKnown RBP17.97■□□□□ 0.47
SYNGR3-204ENST00000564642 IGLV3-16A0A075B6K0 115 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 C17orf113A0A1B0GUU1 675 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 EFCAB7A8K855 629 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 SGTAO43765 313 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 ARSDP51689 593 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 SESN2P58004 480 aaPredicted RBP17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 ZNF449Q6P9G9 518 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 MICALCLQ6ZW33 695 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 ARHGAP22Q7Z5H3 698 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 PIANPQ8IYJ0 282 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 HM13Q8TCT9 377 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 HDAC10Q969S8 669 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 MAGOHBQ96A72 148 aaKnown RBP17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 MS4A14Q96JA4 679 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 C12orf66Q96MD2 445 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 TTC1Q99614 292 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 AP1M1Q9BXS5 423 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 B3GNT4Q9C0J1 378 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 IMP3Q9NV31 184 aaKnown RBP17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 SLC39A1Q9NY26 324 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 SMARCAL1Q9NZC9 954 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 ACSL6Q9UKU0 697 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 RIMKLBQ9ULI2 386 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 TCAF1Q9Y4C2 921 aa17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 CFAP20Q9Y6A4 193 aaKnown RBP17.96■□□□□ 0.47
SYNGR3-204ENST00000564642 CCDC162PA2VCL2 907 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 OR51F1A6NGY5 319 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 C9orf172C9J069 976 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 AP2A2O94973 939 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 MTHFD1P11586 935 aaKnown RBP17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 NPY2RP49146 381 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 TMPRSS3P57727 454 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 CXADRP78310 365 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 PRAMEP78395 509 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 KRT33BQ14525 404 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 TRIP13Q15645 432 aaPredicted RBP17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 DBN1Q16643 649 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 PCID2Q5JVF3 399 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 LYPLAL1Q5VWZ2 237 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 AFTPHQ6ULP2 937 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 OR13J1Q8NGT2 312 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 OR6P1Q8NGX9 317 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 ART4Q93070 314 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 TGM7Q96PF1 710 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 INSM2Q96T92 566 aaPredicted RBP17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 OCIAD1Q9NX40 245 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 BFARQ9NZS9 450 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 OGFRQ9NZT2 677 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 SLC2A6Q9UGQ3 507 aa17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 TTC7AQ9ULT0 858 aaPredicted RBP17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 MN1Q10571 1320 aaPredicted RBP17.95■□□□□ 0.46
SYNGR3-204ENST00000564642 DSPP15924 2871 aaKnown RBP17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 UNC79Q9P2D8 2635 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 PIKFYVEQ9Y2I7 2098 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 PGRMC1O00264 195 aaKnown RBP17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 QSOX1O00391 747 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 CAPN5O15484 640 aaPredicted RBP17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 GOT2P00505 430 aaKnown RBP17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 LIPCP11150 499 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 CD82P27701 267 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 FOXN2P32314 431 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 NSG1P42857 185 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 CDK16Q00536 496 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 CLN3Q13286 438 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 ITIH4Q14624 930 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 PLCL1Q15111 1095 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 KLHL35Q6PF15 583 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms