RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ZNF106Q9H2Y7 1883 aaKnown RBP17.32■□□□□ 0.36
NME3-205ENST00000563854 MIF4GDA9UHW6 222 aaKnown RBP17.31■□□□□ 0.36
NME3-205ENST00000563854 ZIC2O95409 532 aaPredicted RBP17.31■□□□□ 0.36
NME3-205ENST00000563854 PRKAR1AP10644 381 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 ITGALP20701 1170 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 PDE1BQ01064 536 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 MICALCLQ6ZW33 695 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 TIPARPQ7Z3E1 657 aaKnown RBP17.31■□□□□ 0.36
NME3-205ENST00000563854 RASGRP3Q8IV61 690 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 TTC13Q8NBP0 860 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 ZDHHC12Q96GR4 267 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 ZNF514Q96K75 400 aaPredicted RBP17.31■□□□□ 0.36
NME3-205ENST00000563854 C12orf66Q96MD2 445 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 SLC12A9Q9BXP2 914 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 ULBP3Q9BZM4 244 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 ZNF768Q9H5H4 540 aaKnown RBP17.31■□□□□ 0.36
NME3-205ENST00000563854 R3HDM2Q9Y2K5 976 aaKnown RBP17.31■□□□□ 0.36
NME3-205ENST00000563854 DNMT3AQ9Y6K1 912 aaPredicted RBP17.31■□□□□ 0.36
NME3-205ENST00000563854 CFAP46Q8IYW2 2715 aa17.31■□□□□ 0.36
NME3-205ENST00000563854 LOC101059948A0A1B0GTJ6 334 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 MGAT4DA6NG13 374 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 B8ZZF3 427 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 DDX3YO15523 660 aaKnown RBP17.3■□□□□ 0.36
NME3-205ENST00000563854 ZNF189O75820 626 aaPredicted RBP17.3■□□□□ 0.36
NME3-205ENST00000563854 POLBP06746 335 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 SLC35G4P0C7Q5 338 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 RALBP11234 206 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 MTHFD1P11586 935 aaKnown RBP17.3■□□□□ 0.36
NME3-205ENST00000563854 MAP4P27816 1152 aaKnown RBP17.3■□□□□ 0.36
NME3-205ENST00000563854 ZNF140P52738 457 aaPredicted RBP17.3■□□□□ 0.36
NME3-205ENST00000563854 XIAPP98170 497 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 GSE1Q14687 1217 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 DENND5AQ6IQ26 1287 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 PRICKLE2Q7Z3G6 844 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 ULK4Q96C45 1275 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 DNAJC1Q96KC8 554 aaKnown RBP17.3■□□□□ 0.36
NME3-205ENST00000563854 PIH1D1Q9NWS0 290 aaKnown RBP17.3■□□□□ 0.36
NME3-205ENST00000563854 HEMK1Q9Y5R4 338 aaPredicted RBP17.3■□□□□ 0.36
NME3-205ENST00000563854 CAPN6Q9Y6Q1 641 aa17.3■□□□□ 0.36
NME3-205ENST00000563854 TCRBV7S2A1N4TA0A589 114 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 CCDC78A2IDD5 438 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 ZNF891A8MT65 544 aaPredicted RBP17.29■□□□□ 0.36
NME3-205ENST00000563854 PYCARD-AS1I3L0S3 204 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 METTL18O95568 372 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 ZNF28P17035 718 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 TPH1P17752 444 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 MC4RP32245 332 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 HADHAP40939 763 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 GDF10P55107 478 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 KRT33BQ14525 404 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 PARP6Q2NL67 630 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 ZRANB3Q5FWF4 1079 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 METRNLQ641Q3 311 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 KLHL35Q6PF15 583 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 PRSS42Q7Z5A4 293 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 SPDYE1Q8NFV5 336 aaPredicted RBP17.29■□□□□ 0.36
NME3-205ENST00000563854 OR2L2Q8NH16 312 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 ATG4AQ8WYN0 398 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 INSM2Q96T92 566 aaPredicted RBP17.29■□□□□ 0.36
NME3-205ENST00000563854 COPS8Q99627 209 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 TMEM121Q9BTD3 319 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 FAM117AQ9C073 453 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 IMPACTQ9P2X3 320 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 LNPEPQ9UIQ6 1025 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 TMEM184BQ9Y519 407 aaPredicted RBP17.29■□□□□ 0.36
NME3-205ENST00000563854 ZNF462Q96JM2 2506 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 PIEZO2Q9H5I5 2752 aa17.29■□□□□ 0.36
NME3-205ENST00000563854 HELZ2Q9BYK8 2649 aaKnown RBP17.29■□□□□ 0.36
NME3-205ENST00000563854 GOLGA6L6A8MZA4 724 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 CFAP99D6REC4 459 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 J3QKU1 62 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 TOX3O15405 576 aaPredicted RBP17.28■□□□□ 0.36
NME3-205ENST00000563854 SLC28A2O43868 658 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 DLGAP3O95886 979 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 CDC25BP30305 580 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 ARCN1P48444 511 aaKnown RBP17.28■□□□□ 0.36
NME3-205ENST00000563854 ARL4DP49703 201 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 NFKB2Q00653 900 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 POU6F1Q14863 301 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 BCL7AQ4VC05 210 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 BORAQ6PGQ7 559 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 TAS2R42Q7RTR8 314 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 SNX20Q7Z614 316 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 CFAP206Q8IYR0 622 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 NXPE1Q8N323 547 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 LILRA3Q8N6C8 439 aaPredicted RBP17.28■□□□□ 0.36
NME3-205ENST00000563854 STAMBPL1Q96FJ0 436 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 SPRY4Q9C004 299 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 TRIT1Q9H3H1 467 aaKnown RBP17.28■□□□□ 0.36
NME3-205ENST00000563854 LRRC40Q9H9A6 602 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 IL17BQ9UHF5 180 aa17.28■□□□□ 0.36
NME3-205ENST00000563854 FEZ2Q9UHY8 353 aaPredicted RBP17.28■□□□□ 0.36
NME3-205ENST00000563854 IGHV5-51A0A0C4DH38 117 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 NKX2-8O15522 239 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 LDB2O43679 373 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 KIAA0754O94854 1291 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 PRSS56P0CW18 603 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 STAT5AP42229 794 aa17.27■□□□□ 0.36
NME3-205ENST00000563854 CDKN1CP49918 316 aaPredicted RBP17.27■□□□□ 0.36
NME3-205ENST00000563854 ABHD18Q0P651 414 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms